Miyakogusa Predicted Gene

Lj1g3v2069880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2069880.1 Non Chatacterized Hit- tr|I3S8F6|I3S8F6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.46,0,Peptidyl-tRNA hydrolase II,Peptidyl-tRNA hydrolase II
domain; arch_pth2: peptidyl-tRNA hydrolase,Pep,CUFF.28414.1
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09050.1                                                       274   6e-74
Glyma14g21470.1                                                       167   1e-41
Glyma11g10490.1                                                       118   5e-27
Glyma12g02800.1                                                       116   2e-26
Glyma04g08960.1                                                        99   5e-21

>Glyma06g09050.1 
          Length = 196

 Score =  274 bits (700), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 142/196 (72%), Positives = 152/196 (77%), Gaps = 1/196 (0%)

Query: 43  MFPSILNSXXXXXXXXXXXXGEWLAGSFKPENXXXXXXXXXXXXXXXXXSKPHRNLLSKK 102
           MFPSI+NS            GEWLAGSFK EN                 SKP RN LSKK
Sbjct: 1   MFPSIINSNQSRDQQQQKQKGEWLAGSFKAENFIPGLVIGFIFGLLLDLSKPGRNHLSKK 60

Query: 103 IFSPSK-VQQHLTLSGNGDREFKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRS 161
           I S ++  QQ +++S N D+E KMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDR 
Sbjct: 61  ICSSARPQQQQISVSSNADQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRY 120

Query: 162 LLRQWEQCGQPKIVVTCRNQQEMNKLKETAESIGLPTFVVADAGRTEVSAGSKTVLAVGP 221
           LLR+WEQCGQPKIVVTCRNQQEMNKL E AESIGLPTFVVADAGRT+VSAGSKTVLAVGP
Sbjct: 121 LLRRWEQCGQPKIVVTCRNQQEMNKLAEAAESIGLPTFVVADAGRTQVSAGSKTVLAVGP 180

Query: 222 GPKASVDSVTGRLALL 237
           GPK+SVDSVTGRL LL
Sbjct: 181 GPKSSVDSVTGRLPLL 196


>Glyma14g21470.1 
          Length = 139

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/143 (62%), Positives = 99/143 (69%), Gaps = 5/143 (3%)

Query: 43  MFPSILNSXXXXXXXXXXXXGEWLAGSFKPENXXXXXXXXXXXXXXXXXSKPHRNLLSKK 102
           MF SIL +            GEWLAGSFK EN                 SKP RN LSKK
Sbjct: 1   MFLSILTTSHSRNQQK----GEWLAGSFKAENFIPVLIIGFIFGLLLDLSKPSRNHLSKK 56

Query: 103 IFSPSK-VQQHLTLSGNGDREFKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRS 161
           +FS +K  QQ L +S NGD+E KMVLVV+QD  MKSGKIASQCAHAATG+YAELMQSDR 
Sbjct: 57  MFSSAKPQQQQLAVSSNGDQELKMVLVVQQDPNMKSGKIASQCAHAATGIYAELMQSDRC 116

Query: 162 LLRQWEQCGQPKIVVTCRNQQEM 184
           LLR+W+QCGQPKIVVTCRNQQEM
Sbjct: 117 LLRRWDQCGQPKIVVTCRNQQEM 139


>Glyma11g10490.1 
          Length = 190

 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)

Query: 122 EFKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQ 181
           +FKM+LVVR DLKM  GKIA+QC+HA  G+Y ++++     L +WE   QPK+VV   ++
Sbjct: 76  DFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKILRRAPKALNRWEMSAQPKVVVKIESE 135

Query: 182 QEMNKLKETAESIGLPTFVVADAGRTEVSAGSKTVLAVGPGPKASVDSVTGRLALL 237
           ++M  L+E A+S+ LPT +  DAGRT+++  S+TV+A+  GP   VD VTG L LL
Sbjct: 136 EDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDEVTGGLKLL 190


>Glyma12g02800.1 
          Length = 189

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 122 EFKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQ 181
           +FKM+LVVR DLKM  GKIA+QC+HA  G+Y ++++     L +WE   QPK+VV    +
Sbjct: 75  DFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKILRRAPKALNRWEMSAQPKVVVKIECE 134

Query: 182 QEMNKLKETAESIGLPTFVVADAGRTEVSAGSKTVLAVGPGPKASVDSVTGRLALL 237
           ++M  L+E A+S+ LPT +  DAGRT+++  S+TV+A+  GP   VD VTG L LL
Sbjct: 135 EDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDEVTGGLKLL 189


>Glyma04g08960.1 
          Length = 97

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 58/85 (68%), Gaps = 1/85 (1%)

Query: 63  GEWLAGSFKPENXXXXXXXXXXXXXXXXXSKPHRNLLSKKIFSPSK-VQQHLTLSGNGDR 121
           GEWLAGSFK EN                 SKP RN LSKK+FS +K  QQ L +S NGD+
Sbjct: 7   GEWLAGSFKAENFIPGLVIGFIFGLLLDLSKPSRNHLSKKMFSSAKPQQQQLAVSSNGDQ 66

Query: 122 EFKMVLVVRQDLKMKSGKIASQCAH 146
           E KMVLVVRQDLKMKSGKIASQCAH
Sbjct: 67  ELKMVLVVRQDLKMKSGKIASQCAH 91