Miyakogusa Predicted Gene

Lj1g3v2068680.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2068680.1 Non Chatacterized Hit- tr|E6R0S1|E6R0S1_CRYGW
Putative uncharacterized protein OS=Cryptococcus
gatti,32.06,6e-19,zf-RING_2,Zinc finger, RING-type; SWIM,Zinc finger,
SWIM-type; no description,Zinc finger, RING/FYVE,CUFF.28395.1
         (251 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09040.1                                                       249   2e-66
Glyma04g08950.1                                                       230   1e-60

>Glyma06g09040.1 
          Length = 201

 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 122/178 (68%), Positives = 136/178 (76%), Gaps = 1/178 (0%)

Query: 34  SQPISDRIVXXXXXXXXXXXXXXXTFFILGATGNVYTVTLTSSPSCTCPDRTTPCKHILF 93
           SQPISDRIV               TFFILGATGNVYTVTL+SSPSCTCPDRTTPCKHILF
Sbjct: 24  SQPISDRIVRALRHRLRLLHRSGSTFFILGATGNVYTVTLSSSPSCTCPDRTTPCKHILF 83

Query: 94  VLIRVLGVPLEDTILRRKTLRPCHLQRLLSEPTSSEALAGDTLRQRFHQLFFGGGKGGTE 153
           V IRVLGV L+D  LRR+TLRPC LQRLL  PT  E +AG TLRQRFHQLFFGGG     
Sbjct: 84  VFIRVLGVSLDDVCLRRRTLRPCQLQRLLGAPTLPEVVAGGTLRQRFHQLFFGGGSTAGP 143

Query: 154 TVVPEEGASCPICLDEMGKEGKLVACGTCRNAVHEECFVRWRRSKVSGATRCVICRAR 211
            +  EEGA+CP+CL+EMGKE  LVACGTCRN +HEEC ++W+R+K   A+ CVICRAR
Sbjct: 144 KIEMEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLIKWKRTKGRSAS-CVICRAR 200


>Glyma04g08950.1 
          Length = 204

 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/206 (59%), Positives = 140/206 (67%), Gaps = 26/206 (12%)

Query: 34  SQPISDRIVXXXXXXXXXXXXXXXTFFILGATGNVYTVTLTSSPSCTCPDRTTPCKHILF 93
           SQPISDRIV               TFFILGATGNVYTVTL+SSPSCTCPDRTTPCKHILF
Sbjct: 23  SQPISDRIVRALRHRLRLLHRSGSTFFILGATGNVYTVTLSSSPSCTCPDRTTPCKHILF 82

Query: 94  VLIRVLGVPLEDTILRRKTLRPCHLQRLLSEPTSSEALAGDTLRQRFHQLFFGGGKGGTE 153
           VLIRVLGV L+D            LQRLL  PT  EA            LFF GG   T+
Sbjct: 83  VLIRVLGVSLDD------------LQRLLGTPTLPEA------------LFFSGGSTETK 118

Query: 154 TVVPEEGASCPICLDEMGKEGKLVACGTCRNAVHEECFVRWRRSKVSGATRCVICRARWR 213
             + EEGA+CP+CL+EMGKE  LVACGTCRN +HEEC ++W+R+K   A+ CVICRARWR
Sbjct: 119 IEM-EEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMKWKRTKGRSAS-CVICRARWR 176

Query: 214 NRAEQDEYLNLSEYLSDEDVADRDYC 239
           +R EQDEYLNLS Y+ ++DV   D C
Sbjct: 177 DRVEQDEYLNLSAYVGEDDVEQPDVC 202