Miyakogusa Predicted Gene
- Lj1g3v2038800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2038800.1 tr|Q54TG6|Q54TG6_DICDI Lupus La protein
OS=Dictyostelium discoideum GN=DDB_0204655 PE=4
SV=1,34.48,4e-19,RNA-BINDING PROTEIN-RELATED,NULL; LUPUS LA
PROTEIN-RELATED,NULL; "Winged helix" DNA-binding domain,N,CUFF.28606.1
(225 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g08650.2 337 8e-93
Glyma06g08650.1 337 8e-93
Glyma17g25990.1 336 1e-92
Glyma04g08540.1 329 2e-90
Glyma14g21540.1 146 2e-35
Glyma19g45320.3 74 2e-13
Glyma19g45320.1 74 2e-13
Glyma03g42540.2 64 1e-10
Glyma03g42540.1 64 1e-10
Glyma15g10160.1 60 2e-09
Glyma13g28880.3 57 1e-08
Glyma13g28880.1 57 1e-08
Glyma07g33140.1 53 2e-07
Glyma02g15300.1 51 8e-07
>Glyma06g08650.2
Length = 363
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 187/225 (83%), Gaps = 2/225 (0%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
MAT +L+EETTKKVIRQVEFYF DSNL D FMR +++ESEDGM+SLAL+CSFNRMR+H
Sbjct: 1 MAT-QSLDEETTKKVIRQVEFYFGDSNLLTDGFMRNSITESEDGMISLALICSFNRMRKH 59
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
LNLGDVK E+V +DTV AVA LRNSA+LKVSEDGKKVGR TELPK EEV EQV+IRT+A
Sbjct: 60 LNLGDVKPEEVAQDTVNAVAQTLRNSATLKVSEDGKKVGRKTELPKLEEV-EQVEIRTLA 118
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
SPF++DLKLEDVE F QYAKVNSVRLP HVGDKKFFCGTAL+EFSS
Sbjct: 119 VSPFEHDLKLEDVEKLFGQYAKVNSVRLPHHVGDKKFFCGTALVEFSSEEDVEKVMKEKL 178
Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADE 225
YAGAELELKPKKDFDA+R+KELE+Y+KS P GSN QNN++ +E
Sbjct: 179 VYAGAELELKPKKDFDADREKELEDYKKSRPPVGSNQQNNTNVEE 223
>Glyma06g08650.1
Length = 460
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 187/225 (83%), Gaps = 2/225 (0%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
MAT +L+EETTKKVIRQVEFYF DSNL D FMR +++ESEDGM+SLAL+CSFNRMR+H
Sbjct: 1 MAT-QSLDEETTKKVIRQVEFYFGDSNLLTDGFMRNSITESEDGMISLALICSFNRMRKH 59
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
LNLGDVK E+V +DTV AVA LRNSA+LKVSEDGKKVGR TELPK EEV EQV+IRT+A
Sbjct: 60 LNLGDVKPEEVAQDTVNAVAQTLRNSATLKVSEDGKKVGRKTELPKLEEV-EQVEIRTLA 118
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
SPF++DLKLEDVE F QYAKVNSVRLP HVGDKKFFCGTAL+EFSS
Sbjct: 119 VSPFEHDLKLEDVEKLFGQYAKVNSVRLPHHVGDKKFFCGTALVEFSSEEDVEKVMKEKL 178
Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADE 225
YAGAELELKPKKDFDA+R+KELE+Y+KS P GSN QNN++ +E
Sbjct: 179 VYAGAELELKPKKDFDADREKELEDYKKSRPPVGSNQQNNTNVEE 223
>Glyma17g25990.1
Length = 406
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/224 (73%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
M+T +L+EET KKV+RQVEFYFSDSNLP+DNF+RKTV+ESEDGMVSLAL+CSFNRMR +
Sbjct: 1 MST-ASLDEETAKKVVRQVEFYFSDSNLPRDNFLRKTVTESEDGMVSLALICSFNRMRTN 59
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
LNLGDVK + VT+DTVKAVA L+NSA ++VSEDG KVGR TEL K EEVIEQV+IRTIA
Sbjct: 60 LNLGDVKLDGVTKDTVKAVAQALKNSALVRVSEDGTKVGRATELLKPEEVIEQVEIRTIA 119
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
A PF+YD+KLEDVETFF+QYAKVNSVRLPRHVGDKKFFCGTAL+EFSS
Sbjct: 120 ALPFEYDVKLEDVETFFAQYAKVNSVRLPRHVGDKKFFCGTALVEFSSDEETEKVLKQSL 179
Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDAD 224
YAGAEL+LK KKDFDA+R+KELEE EK P GS HQNN++ +
Sbjct: 180 VYAGAELQLKLKKDFDAQREKELEEQEKFRPPLGSGHQNNTNTE 223
>Glyma04g08540.1
Length = 488
Score = 329 bits (843), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 188/225 (83%), Gaps = 2/225 (0%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
MAT +L+EETTKKVIRQVEFYF DSNL D FMRK+++ESEDGM+SLAL+CSFNRMR+H
Sbjct: 1 MAT-QSLDEETTKKVIRQVEFYFGDSNLLTDGFMRKSITESEDGMISLALICSFNRMRKH 59
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
LNLGDVK ++V ++TV VA LRNSASLKVSEDGKKVGR TELPK E+V EQV+IRT+A
Sbjct: 60 LNLGDVKPDEVAQETVNTVAQTLRNSASLKVSEDGKKVGRKTELPKLEDV-EQVEIRTLA 118
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXX 180
SPF+YDLKLEDVE FF QYAKVNSVRLP HVGDKK FCGTAL+EFSS
Sbjct: 119 VSPFEYDLKLEDVEKFFGQYAKVNSVRLPHHVGDKKLFCGTALVEFSSEEEVEKVMKEKM 178
Query: 181 XYAGAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDADE 225
YAGAELELKPKKDFDAER+KELE+Y+KS P GSNHQN+S+ +E
Sbjct: 179 VYAGAELELKPKKDFDAEREKELEDYKKSRPPVGSNHQNSSNVEE 223
>Glyma14g21540.1
Length = 366
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 78/101 (77%)
Query: 124 FQYDLKLEDVETFFSQYAKVNSVRLPRHVGDKKFFCGTALIEFSSXXXXXXXXXXXXXYA 183
F+YD+KLED+ETFF QYAKVNSVRLPRHVGDKKFFCGTAL EFS YA
Sbjct: 61 FEYDVKLEDMETFFGQYAKVNSVRLPRHVGDKKFFCGTALDEFSLDEEKEKVLKQSLVYA 120
Query: 184 GAELELKPKKDFDAERQKELEEYEKSHPSTGSNHQNNSDAD 224
GAELELKPKKDFDA+R+KELEE+E P GS HQNN++ +
Sbjct: 121 GAELELKPKKDFDAQREKELEEHENFRPPVGSGHQNNTNTE 161
>Glyma19g45320.3
Length = 467
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
+++ + +++E ++K++ QVE+YFSD NL + + + V++ +G V ++++ SF +++
Sbjct: 140 LSSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFVNKDPEGFVPISVVASFKKIKAL 199
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
+ + +A VLRNS+ L VSEDGKK+ R + P TE IE++ R +
Sbjct: 200 IA------------SHSQLATVLRNSSKLVVSEDGKKIKR--QYPLTESDIEEIQSRIVV 245
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVR 147
A D +++ FS V ++R
Sbjct: 246 AENLPEDHCHQNLMKVFSAVGSVKTIR 272
>Glyma19g45320.1
Length = 468
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 1 MATPTTLNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQH 60
+++ + +++E ++K++ QVE+YFSD NL + + + V++ +G V ++++ SF +++
Sbjct: 140 LSSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFVNKDPEGFVPISVVASFKKIKAL 199
Query: 61 LNLGDVKAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIA 120
+ + +A VLRNS+ L VSEDGKK+ R + P TE IE++ R +
Sbjct: 200 IA------------SHSQLATVLRNSSKLVVSEDGKKIKR--QYPLTESDIEEIQSRIVV 245
Query: 121 ASPFQYDLKLEDVETFFSQYAKVNSVR 147
A D +++ FS V ++R
Sbjct: 246 AENLPEDHCHQNLMKVFSAVGSVKTIR 272
>Glyma03g42540.2
Length = 523
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 18 QVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKAEDVTEDTVK 77
QVE+YFSD NL + + + +++ +G V ++++ SF +++ + +
Sbjct: 213 QVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIA------------SHS 260
Query: 78 AVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDLKLEDVETFF 137
+A VLRNS+ L VSEDGKK+ R + P TE IE++ R + A D +++ F
Sbjct: 261 QLATVLRNSSKLVVSEDGKKIKR--QYPLTESDIEELQSRIVVAENLPEDHCHQNLMKVF 318
Query: 138 SQYAKVNSVR 147
S V ++R
Sbjct: 319 SAVGSVKTIR 328
>Glyma03g42540.1
Length = 524
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 18 QVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKAEDVTEDTVK 77
QVE+YFSD NL + + + +++ +G V ++++ SF +++ + +
Sbjct: 213 QVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIA------------SHS 260
Query: 78 AVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQYDLKLEDVETFF 137
+A VLRNS+ L VSEDGKK+ R + P TE IE++ R + A D +++ F
Sbjct: 261 QLATVLRNSSKLVVSEDGKKIKR--QYPLTESDIEELQSRIVVAENLPEDHCHQNLMKVF 318
Query: 138 SQYAKVNSVR 147
S V ++R
Sbjct: 319 SAVGSVKTIR 328
>Glyma15g10160.1
Length = 405
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 12/96 (12%)
Query: 9 EETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKA 68
E+ K+I+QVE+YFSD NLP D ++ V +++G V ++++ SF ++++
Sbjct: 101 EDLKLKIIKQVEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKK--------- 151
Query: 69 EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTEL 104
+T D VA L+ S+ L VS DGK+V R L
Sbjct: 152 --LTRDHAFIVA-ALKESSLLVVSGDGKRVKRLNPL 184
>Glyma13g28880.3
Length = 378
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 14 KVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKAEDVTE 73
K+I+Q E+YFSD NLP D ++ V +++G V ++++ SF ++++ +T
Sbjct: 102 KIIKQAEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKK-----------LTR 150
Query: 74 DTVKAVAHVLRNSASLKVSEDGKKVGRTTEL 104
D VA L+ S+ L VS DG++V R L
Sbjct: 151 DHAFIVA-ALKESSLLVVSGDGRRVKRLNPL 180
>Glyma13g28880.1
Length = 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 9 EETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDVKA 68
E+ K+I+Q E+YFSD NLP D ++ V +++G V ++++ SF ++++
Sbjct: 97 EDLKLKIIKQAEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKK--------- 147
Query: 69 EDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTEL 104
+T D VA L+ S+ L VS DG++V R L
Sbjct: 148 --LTRDHAFIVA-ALKESSLLVVSGDGRRVKRLNPL 180
>Glyma07g33140.1
Length = 399
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 7 LNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDV 66
L + +K+++QVE+ FSD +L + K +++ +G V + ++ S +++ ++
Sbjct: 91 LTPDLQQKIVKQVEYQFSDMSLLANESFHKQINKDPEGYVPITVIASTKKVKSLVS---- 146
Query: 67 KAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQY 126
+ + +R+S+ L +S DGKKV R + P TE E + RT+ A
Sbjct: 147 --------NINMLTQAIRSSSKLVLSVDGKKVKR--KHPYTEREKEDLQSRTVVAENLPD 196
Query: 127 DLKLEDVETFFSQYAKVNSVRL 148
D ++++ F V ++R+
Sbjct: 197 DHSHQNLQKIFGMVGSVKTIRI 218
>Glyma02g15300.1
Length = 404
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 7 LNEETTKKVIRQVEFYFSDSNLPKDNFMRKTVSESEDGMVSLALLCSFNRMRQHLNLGDV 66
L + +K+++QVE+ FSD +L + K +++ +G V + ++ S +++ ++
Sbjct: 93 LTPDLQQKIVKQVEYQFSDMSLLANESFHKQMNKDPEGYVPITVIASTKKVKSLVS---- 148
Query: 67 KAEDVTEDTVKAVAHVLRNSASLKVSEDGKKVGRTTELPKTEEVIEQVDIRTIAASPFQY 126
+ + +R+S+ L +S DGKKV R + P TE+ E + RT+ A
Sbjct: 149 --------NINMLTQAIRSSSKLVLSVDGKKVKR--KHPYTEKEKEDLLARTVVAENLPD 198
Query: 127 DLKLEDVETFFSQYAKVNSVRL 148
D ++++ F V ++R+
Sbjct: 199 DHSHQNLQKIFGIVGSVKTIRI 220