Miyakogusa Predicted Gene
- Lj1g3v2036760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2036760.1 Non Chatacterized Hit- tr|I1JUR6|I1JUR6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38858 PE,84.41,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
GTPase_EngB,GTP-binding protein, ribosome,CUFF.28339.1
(292 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g08580.1 427 e-120
Glyma04g08470.1 427 e-120
Glyma13g24780.1 317 1e-86
Glyma07g31670.1 313 1e-85
Glyma11g30090.1 109 4e-24
Glyma18g06150.1 96 7e-20
Glyma11g30700.1 74 1e-13
Glyma15g30620.1 53 4e-07
>Glyma06g08580.1
Length = 293
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/271 (82%), Positives = 242/271 (89%), Gaps = 5/271 (1%)
Query: 25 YSKTTLLFQPKXXXXXXXXXXXX---XXXXXDKLFIPPETKLPLDAAAARILNGSNILLS 81
YSKTTLL PK +KLF+PPET + L+++ R+LNGSNILLS
Sbjct: 25 YSKTTLLRPPKSTLTTSQPLTVNPSPTELSLEKLFVPPETTVSLESS--RVLNGSNILLS 82
Query: 82 DYASDAQVLQADFVKSSVETDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKK 141
+YA+DAQVLQA+FVKSSV+T+ CPSDG+PEFALVGRSNVGKSSLLNSLVRRKKLALTSKK
Sbjct: 83 NYANDAQVLQAEFVKSSVKTEDCPSDGIPEFALVGRSNVGKSSLLNSLVRRKKLALTSKK 142
Query: 142 PGKTQCINHFRINNSWYLVDLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVFLLIDA 201
PGKTQCINHFRINNSWYLVDLPGYGYASAP ELRMDWEKF+KDYFLNRSTLVSVFLLIDA
Sbjct: 143 PGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRSTLVSVFLLIDA 202
Query: 202 SIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRKKVKNGGKRPEENVNDFQDLIRGFFQTV 261
SIPAK+IDLDYASWLGQNQIPMTLIFTKCDKRKK KNGGKRPE+NVNDFQDLIRGFFQ+V
Sbjct: 203 SIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQDLIRGFFQSV 262
Query: 262 PPWIMTSSVTHQGRDEILLHMAQLRNYWLKH 292
PPWIMTSSVT+QGRDEILLHMAQLRNYWLKH
Sbjct: 263 PPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 293
>Glyma04g08470.1
Length = 293
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/295 (77%), Positives = 245/295 (83%), Gaps = 5/295 (1%)
Query: 1 MVLLHXXXXXXXXXXXXXXXXXXXYSKTTLLFQPKXXXXXXXXXXXX---XXXXXDKLFI 57
MVLLH YSKTTLL PK +KLF+
Sbjct: 1 MVLLHLPRFPLYLVTLSPSLTLRAYSKTTLLRPPKSTLTASEPVSVNPSPTELSLEKLFV 60
Query: 58 PPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFALVGR 117
PPET + L+++ R+LNGSNILLS+YA+DA VLQA+FVKSSV+T+ CPSDGL EFALVGR
Sbjct: 61 PPETTVSLESS--RVLNGSNILLSNYANDALVLQAEFVKSSVKTEDCPSDGLAEFALVGR 118
Query: 118 SNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKELRMD 177
SNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAP ELRMD
Sbjct: 119 SNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMD 178
Query: 178 WEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRKKVK 237
WEKF+KDYFLNRSTLVSVFLLIDASIPAK+IDLDYASWLGQNQIPMTLIFTKCDKRKK K
Sbjct: 179 WEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKK 238
Query: 238 NGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH 292
NGGKRPEENVNDFQDLIRGFFQ+VPPWIMTSSVT+QGRDEILLHMAQLRNYWLKH
Sbjct: 239 NGGKRPEENVNDFQDLIRGFFQSVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 293
>Glyma13g24780.1
Length = 253
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/236 (63%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
Query: 54 KLFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFA 113
+LFIPP + P + + +L GSNI + YA D+++ FVKSS CP D LPEFA
Sbjct: 19 QLFIPPGIE-PDEVDDSTVLPGSNIAVGPYAGDSRIKDVQFVKSSARARDCPKDDLPEFA 77
Query: 114 LVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKE 173
++GRSNVGKSSL+NSLVR+K++ALTSKKPGKTQ INHF +N SWYLVDLPGYG+A AP+
Sbjct: 78 VLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEA 137
Query: 174 LRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKR 233
+ DW F+K YFLNRSTLV+V LLIDAS+P +K+DLD A+WLG+N IP+T +FTKCDK
Sbjct: 138 AKTDWSSFTKGYFLNRSTLVAVLLLIDASVPPQKVDLDCANWLGRNNIPITFVFTKCDKM 197
Query: 234 KKVKNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYW 289
K K GKRP+EN+ DFQ+LIR ++ PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 198 KVAK--GKRPDENIRDFQELIRQNYKQHPPWIMTSSVTGMGRDELLLHMSQLRNYW 251
>Glyma07g31670.1
Length = 301
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/236 (62%), Positives = 182/236 (77%), Gaps = 3/236 (1%)
Query: 54 KLFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFA 113
+LFIPP + P + + +L GSNI + YA D+ + FVKSS CP D PEFA
Sbjct: 67 QLFIPPGIE-PDEVNDSTVLPGSNIAVGPYAGDSHIKDVQFVKSSARARDCPKDNRPEFA 125
Query: 114 LVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKE 173
++GRSNVGKSSL+NSLVR+K++ALTSKKPGKTQ INHF +N SWYLVDLPGYG+A AP+
Sbjct: 126 VLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEA 185
Query: 174 LRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKR 233
+ DW F+K YFLN+STLV+V LLIDAS+P +KIDLD A+WLG+N IP+T +FTKCDK
Sbjct: 186 AKTDWSSFTKGYFLNKSTLVAVLLLIDASVPPQKIDLDCANWLGRNNIPITFVFTKCDKM 245
Query: 234 KKVKNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYW 289
K K GKRP+EN+ DFQ+LIR ++ PPWIMTSS T GRDE+LLHM+QLRNYW
Sbjct: 246 KVAK--GKRPDENIRDFQELIRQNYKQHPPWIMTSSATGMGRDELLLHMSQLRNYW 299
>Glyma11g30090.1
Length = 496
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 80/139 (57%)
Query: 93 DFVKSSVETDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFR 152
DF ++ + + P LPE A GRSNVGKSSLLN+L R+ + TS KPG TQ IN F
Sbjct: 302 DFFAAAKVSSSFPPPNLPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFN 361
Query: 153 INNSWYLVDLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDY 212
+ LVDLPGYG+A A +E++ WE+ K+Y R L V LLID K DL+
Sbjct: 362 LGTKHCLVDLPGYGFAYAKEEVKESWEELVKEYVSTRVGLRRVCLLIDTKWGMKPRDLEL 421
Query: 213 ASWLGQNQIPMTLIFTKCD 231
+ +++ ++ TK D
Sbjct: 422 IELMERSKTKYQIVLTKTD 440
>Glyma18g06150.1
Length = 1436
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 117 RSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKELRM 176
RSNVGKSSLLN+L R+ + TS KPG TQ IN F++ LVDLPGYG+A A +E++
Sbjct: 1266 RSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFQLGTKHCLVDLPGYGFAYAKEEVKE 1325
Query: 177 DWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRKKV 236
WE+ K+Y R L V LLID K DL+ + +++ ++ TK D +
Sbjct: 1326 SWEELVKEYVSTRVGLKRVCLLIDTKWGMKPRDLELIELMERSKTKYQIVLTKTDMVFPI 1385
Query: 237 KNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNY 288
+ + N FQ+ V P +M SS + G + +A + +
Sbjct: 1386 DVARRAMQIEENLFQNK-----SVVKPVMMVSSNSGAGIRSLRTALANITRF 1432
>Glyma11g30700.1
Length = 66
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%)
Query: 89 VLQADFVKSSVETDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKP 142
+L FVK+ V+T+ PSDGLPEFALVGRSNV KSSLLNSLVR KKL LT KKP
Sbjct: 12 LLHGPFVKNIVKTEDYPSDGLPEFALVGRSNVRKSSLLNSLVRWKKLTLTLKKP 65
>Glyma15g30620.1
Length = 106
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 54 KLFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFA 113
+LFIPP + P + + I GSNI++ YA ++++ FVKSS T CP D LP+F
Sbjct: 32 QLFIPPSIE-PDEVDDSTIFPGSNIVVRPYADNSRIKDVQFVKSSARTRDCPKDDLPKFV 90
Query: 114 LVG 116
++G
Sbjct: 91 VLG 93