Miyakogusa Predicted Gene

Lj1g3v1991610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1991610.1 Non Chatacterized Hit- tr|E1Z214|E1Z214_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.61,8e-19,seg,NULL; RNase_H2-Ydr279,Ribonuclease H2,
subunit B; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.28255.1
         (342 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08230.3                                                       453   e-127
Glyma06g08230.2                                                       453   e-127
Glyma06g08230.1                                                       453   e-127
Glyma04g08160.1                                                       308   8e-84

>Glyma06g08230.3 
          Length = 275

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/276 (79%), Positives = 234/276 (84%), Gaps = 1/276 (0%)

Query: 67  MSWSNGIQEPRVLVAPDPGIDGNCSGHMILLRHPKTGNGTQYLFVNGALQELQWFKNLYG 126
           MSW + +QEPR+LVAPDPG DGN  G MI LRHPK+GN TQYLFVNG LQELQWFKNLYG
Sbjct: 1   MSWCDSVQEPRILVAPDPGTDGNGLGQMISLRHPKSGNATQYLFVNGMLQELQWFKNLYG 60

Query: 127 SWFLGDYTCEDGRMYLSTPVDPVFIMLPIFEEARMKKRDGDLGNFRQLDEILYIDGYPGY 186
           SWFLGDY  EDGRMYLSTP+DPVFIMLPIFEEARMKK D DLG FRQLDEIL+IDGYPGY
Sbjct: 61  SWFLGDYITEDGRMYLSTPIDPVFIMLPIFEEARMKKGD-DLGRFRQLDEILFIDGYPGY 119

Query: 187 HQLMSTVENCMQVVCEVKEVGSLKFFRLDDSKVLRWLCYKACQLKQTLPKLDKNYAVQSE 246
            QLMS VENCM VV EVKE+GS KFFRLDDSKVLRWLCYK CQLKQTLPKLDKNYAVQSE
Sbjct: 120 MQLMSVVENCMLVVSEVKEIGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSE 179

Query: 247 KDTLVDAVSILGEYLKEEPWXXXXXXXXXXXXXEVTGRTQVNTEESSAGLYNESQEPNDE 306
           KDTL+DAVSILGEYLKE+PW             EVTG+ QVN EES+ GL NE QE +++
Sbjct: 180 KDTLIDAVSILGEYLKEKPWLQLLCDHLKLNILEVTGKAQVNAEESNPGLRNELQEQSND 239

Query: 307 KKAPIAKKGRQAKKTKLETESHNIKDMFSRASRKKS 342
           KKA  AKKGRQAKK KLETESHNIKDMFSRASRKK+
Sbjct: 240 KKATTAKKGRQAKKVKLETESHNIKDMFSRASRKKN 275


>Glyma06g08230.2 
          Length = 275

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/276 (79%), Positives = 234/276 (84%), Gaps = 1/276 (0%)

Query: 67  MSWSNGIQEPRVLVAPDPGIDGNCSGHMILLRHPKTGNGTQYLFVNGALQELQWFKNLYG 126
           MSW + +QEPR+LVAPDPG DGN  G MI LRHPK+GN TQYLFVNG LQELQWFKNLYG
Sbjct: 1   MSWCDSVQEPRILVAPDPGTDGNGLGQMISLRHPKSGNATQYLFVNGMLQELQWFKNLYG 60

Query: 127 SWFLGDYTCEDGRMYLSTPVDPVFIMLPIFEEARMKKRDGDLGNFRQLDEILYIDGYPGY 186
           SWFLGDY  EDGRMYLSTP+DPVFIMLPIFEEARMKK D DLG FRQLDEIL+IDGYPGY
Sbjct: 61  SWFLGDYITEDGRMYLSTPIDPVFIMLPIFEEARMKKGD-DLGRFRQLDEILFIDGYPGY 119

Query: 187 HQLMSTVENCMQVVCEVKEVGSLKFFRLDDSKVLRWLCYKACQLKQTLPKLDKNYAVQSE 246
            QLMS VENCM VV EVKE+GS KFFRLDDSKVLRWLCYK CQLKQTLPKLDKNYAVQSE
Sbjct: 120 MQLMSVVENCMLVVSEVKEIGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSE 179

Query: 247 KDTLVDAVSILGEYLKEEPWXXXXXXXXXXXXXEVTGRTQVNTEESSAGLYNESQEPNDE 306
           KDTL+DAVSILGEYLKE+PW             EVTG+ QVN EES+ GL NE QE +++
Sbjct: 180 KDTLIDAVSILGEYLKEKPWLQLLCDHLKLNILEVTGKAQVNAEESNPGLRNELQEQSND 239

Query: 307 KKAPIAKKGRQAKKTKLETESHNIKDMFSRASRKKS 342
           KKA  AKKGRQAKK KLETESHNIKDMFSRASRKK+
Sbjct: 240 KKATTAKKGRQAKKVKLETESHNIKDMFSRASRKKN 275


>Glyma06g08230.1 
          Length = 275

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/276 (79%), Positives = 234/276 (84%), Gaps = 1/276 (0%)

Query: 67  MSWSNGIQEPRVLVAPDPGIDGNCSGHMILLRHPKTGNGTQYLFVNGALQELQWFKNLYG 126
           MSW + +QEPR+LVAPDPG DGN  G MI LRHPK+GN TQYLFVNG LQELQWFKNLYG
Sbjct: 1   MSWCDSVQEPRILVAPDPGTDGNGLGQMISLRHPKSGNATQYLFVNGMLQELQWFKNLYG 60

Query: 127 SWFLGDYTCEDGRMYLSTPVDPVFIMLPIFEEARMKKRDGDLGNFRQLDEILYIDGYPGY 186
           SWFLGDY  EDGRMYLSTP+DPVFIMLPIFEEARMKK D DLG FRQLDEIL+IDGYPGY
Sbjct: 61  SWFLGDYITEDGRMYLSTPIDPVFIMLPIFEEARMKKGD-DLGRFRQLDEILFIDGYPGY 119

Query: 187 HQLMSTVENCMQVVCEVKEVGSLKFFRLDDSKVLRWLCYKACQLKQTLPKLDKNYAVQSE 246
            QLMS VENCM VV EVKE+GS KFFRLDDSKVLRWLCYK CQLKQTLPKLDKNYAVQSE
Sbjct: 120 MQLMSVVENCMLVVSEVKEIGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSE 179

Query: 247 KDTLVDAVSILGEYLKEEPWXXXXXXXXXXXXXEVTGRTQVNTEESSAGLYNESQEPNDE 306
           KDTL+DAVSILGEYLKE+PW             EVTG+ QVN EES+ GL NE QE +++
Sbjct: 180 KDTLIDAVSILGEYLKEKPWLQLLCDHLKLNILEVTGKAQVNAEESNPGLRNELQEQSND 239

Query: 307 KKAPIAKKGRQAKKTKLETESHNIKDMFSRASRKKS 342
           KKA  AKKGRQAKK KLETESHNIKDMFSRASRKK+
Sbjct: 240 KKATTAKKGRQAKKVKLETESHNIKDMFSRASRKKN 275


>Glyma04g08160.1 
          Length = 211

 Score =  308 bits (788), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 157/212 (74%), Positives = 171/212 (80%), Gaps = 8/212 (3%)

Query: 138 GRMYLSTPVDPVFIMLPIFEEARMKKRDGDLGNFRQLDEILYIDGYPGYHQLMSTVENCM 197
           GR+YLSTP+DPVFIMLPIF+EARMKK D DLG FRQLDEIL++DGYPGY QLMS VENCM
Sbjct: 1   GRLYLSTPIDPVFIMLPIFKEARMKKGD-DLGRFRQLDEILFVDGYPGYMQLMSIVENCM 59

Query: 198 QVVCEVKEVGSLKFFRLDDSKVLRWLCYKACQLKQTLPKLDKNYAVQSEKDTLVDAVSIL 257
           QVV E+ EVGS KFFRLDDSKVLRWLCYK CQLKQTLPKLDKNYAVQSEKDTL+DAVSIL
Sbjct: 60  QVVSEIIEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSIL 119

Query: 258 GEYLKEEPWXXXXXXXXX------XXXXEVTGRTQVNTE-ESSAGLYNESQEPNDEKKAP 310
           GEYLKEEPW                   EVTG+ Q N E  +++ L NE QE +++KK  
Sbjct: 120 GEYLKEEPWLQLLCNHLKRFFFCRLNILEVTGKAQANAEGNNNSRLCNELQEQSNDKKGT 179

Query: 311 IAKKGRQAKKTKLETESHNIKDMFSRASRKKS 342
            AKKGRQAKK KLETESHNIKDMFSRASRKKS
Sbjct: 180 TAKKGRQAKKVKLETESHNIKDMFSRASRKKS 211