Miyakogusa Predicted Gene

Lj1g3v1968360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1968360.1 Non Chatacterized Hit- tr|I1JUN1|I1JUN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25875
PE,87.36,3e-19,seg,NULL; coiled-coil,NULL,CUFF.28247.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08050.1                                                        89   9e-19
Glyma06g08100.1                                                        87   3e-18

>Glyma04g08050.1 
          Length = 254

 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 48/59 (81%)

Query: 25  KARKVPXXXXXXXXXLAEEKKQEDPVQMRHNRIPESYAAHMRLRLGSFKSRSFSLADLQ 83
           KARKVP         LAEEKKQED VQ+R NR+PESYAAHMRLRLGSFK+RSFSLADLQ
Sbjct: 186 KARKVPSASSSSSSSLAEEKKQEDQVQLRLNRVPESYAAHMRLRLGSFKARSFSLADLQ 244


>Glyma06g08100.1 
          Length = 252

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 47/59 (79%)

Query: 25  KARKVPXXXXXXXXXLAEEKKQEDPVQMRHNRIPESYAAHMRLRLGSFKSRSFSLADLQ 83
            ARKVP         LAEEKKQED VQ+R NR+PESYAAHMRLRLGSFK+RSFSLADLQ
Sbjct: 183 NARKVPSASSSSSSSLAEEKKQEDQVQLRFNRMPESYAAHMRLRLGSFKARSFSLADLQ 241