Miyakogusa Predicted Gene

Lj1g3v1966220.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1966220.2 Non Chatacterized Hit- tr|B6SVE9|B6SVE9_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,32.62,5e-18,seg,NULL,CUFF.28215.2
         (592 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g07930.1                                                       311   1e-84
Glyma04g07920.1                                                       258   1e-68
Glyma06g07960.1                                                       156   6e-38
Glyma06g07970.1                                                       123   5e-28

>Glyma04g07930.1 
          Length = 283

 Score =  311 bits (797), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 173/287 (60%), Positives = 210/287 (73%), Gaps = 17/287 (5%)

Query: 319 MEHKNDVNSSAIENLGTSLGENAHNFTNLVDASASLATGLGSQAPSDLQNKMDGLQPKYV 378
           ME+KN+VNSSAIEN+G SLGE  HN TNLVDAS +LA GLGSQ   DL++K+D  QP+ V
Sbjct: 1   MENKNNVNSSAIENIGASLGERVHNSTNLVDASVNLARGLGSQVSPDLESKLDEFQPESV 60

Query: 379 QADHPANFNSEQNQVSVAVEQTKGTQEDCREVTTSGLRDGSSDDLHRDSGLLKVNGISDT 438
            ++ P N N EQNQ SVAV+QT+GT++  RE+TTSGLRDGSSDD+HRD  L+KVNGISDT
Sbjct: 61  LSN-PVNTNFEQNQGSVAVQQTRGTEDGSREITTSGLRDGSSDDMHRDGSLVKVNGISDT 119

Query: 439 NGSNHQLHSVEETGEALNSRLQDGNCLAFKEKVEAEDAVANGF----SSFHAGQVIEENT 494
           NGS HQL SVEET +A+NSRLQD N L  KEKV AEDA+ANGF     SF+AGQVIE+NT
Sbjct: 120 NGSGHQLDSVEETRDAINSRLQDSNHLVIKEKVGAEDALANGFPSSGPSFNAGQVIEQNT 179

Query: 495 KTLDNKPSAVDASQERTTEGVLEQEDC---KQSMEMPGVVVNDPVAVKDDSTATGXXXXX 551
           KTLDNKP+  D+SQERT +GVLEQE+C   ++S E+P V+ +D VA   D  A+G     
Sbjct: 180 KTLDNKPNTTDSSQERTAQGVLEQEECQTLRESTEVPDVIGDDSVA---DRVASGSQNSS 236

Query: 552 XXXXXXXXXXK-----GSQATPTSIANRKGKRI-TRSTRKDRSRGVK 592
                     +     G  ATPTSIA +KG+RI TR  R+ RS+GVK
Sbjct: 237 SMYEVQHDTSQPGVELGLPATPTSIAKQKGRRITTRYNRRGRSKGVK 283


>Glyma04g07920.1 
          Length = 281

 Score =  258 bits (660), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/288 (53%), Positives = 175/288 (60%), Gaps = 12/288 (4%)

Query: 1   MASISGSQLGGKKVXXXXXXXXXXXX-XXXXXXXXXXXSPNWLSRLVISPTRFIASGAGK 59
           MAS+ GS+ GGK V                        SPNWLSR VISP+RFIASGAGK
Sbjct: 1   MASVPGSRSGGKIVRTRRSAAARSHTPYDRPAPPPEPPSPNWLSRFVISPSRFIASGAGK 60

Query: 60  ILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDDENDNTFEGDDDALNK---PLD 116
           I S+VLDL+                      EEVG  DDENDN  EGD  AL+K   P  
Sbjct: 61  IFSSVLDLDNSPSDSSSATCSLSSSANDSDAEEVGTFDDENDNPSEGDV-ALSKGLQPFV 119

Query: 117 GNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNGDVDKRTSDMAIRTXXXXX 176
            N K+KH+IEQLLM+ESFSREE DRLIKIIRSRVVD P  + D DKR +DM+ +      
Sbjct: 120 RNSKNKHMIEQLLMKESFSREECDRLIKIIRSRVVD-PANDDDGDKRPTDMSNKILGSDS 178

Query: 177 XXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQAPNGEGSPVDVAKLYMRA 236
                  +MEAKKWLQ+KKS +D+N+D+  G   +        P  EGSPVDVAK YM  
Sbjct: 179 PELHDVAIMEAKKWLQEKKSALDTNTDIVCGETYI------HDPKDEGSPVDVAKSYMCT 232

Query: 237 RPPWASPSVDHNKPPTLSGIQLFKEETPHLFSGNSTSSSKLKRGSPAT 284
           RPPWASPS+DH KP T SGIQLFKEETP+LF  NS  SSKLKR S AT
Sbjct: 233 RPPWASPSIDHTKPQTPSGIQLFKEETPYLFGNNSMPSSKLKRDSAAT 280


>Glyma06g07960.1 
          Length = 205

 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/161 (55%), Positives = 103/161 (63%), Gaps = 5/161 (3%)

Query: 40  NWLSRLVISPTRFIASGAGKILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDDE 99
           NW+SR VISP+RFIASGAGKI S+VLDL+                      EEVG  DDE
Sbjct: 44  NWISRFVISPSRFIASGAGKIFSSVLDLDNSPSDSSSATSSHSSSANDSDAEEVGTFDDE 103

Query: 100 NDNTFEGDDDALNK---PLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTV 156
           NDN  EGD  AL+K   P  GN KSKH+IEQLLM+ESFSREE DRLIKIIRSRVVD P  
Sbjct: 104 NDNPSEGDV-ALSKGLQPCVGNSKSKHMIEQLLMKESFSREECDRLIKIIRSRVVD-PAN 161

Query: 157 NGDVDKRTSDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSG 197
           + D DKR +D+  +             +MEAKKWL++KKSG
Sbjct: 162 DDDGDKRPTDIPNKIFGSDSPELHSAAIMEAKKWLREKKSG 202


>Glyma06g07970.1 
          Length = 151

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 12/147 (8%)

Query: 454 ALNSRLQDGNCLAFKEKVEAEDAVANGFSS----FHAGQVIEENTKTLDNKPSAVDASQE 509
           A+NSRLQD N L  KEKV AEDA+ANGF S    F+ GQVIE++TKTLDNKP+  D+SQE
Sbjct: 9   AINSRLQDSNHLVIKEKVRAEDALANGFPSSEPSFNPGQVIEQSTKTLDNKPNTTDSSQE 68

Query: 510 RTTEGVLEQEDC---KQSMEMPGVVVNDPVAVKDDSTATGXXXXXXXXXXXXXXXKGSQA 566
           RT +G LEQE+C   ++S E+P V+ +D VA       +G                G   
Sbjct: 69  RTAQG-LEQEECQTLRESAEVPDVIGDDSVA---GGVVSGSQNSSSVYEVQPGVESGLST 124

Query: 567 TPTSIANRKGKRI-TRSTRKDRSRGVK 592
           TPTSIA +KG+RI TR  R+ R +GVK
Sbjct: 125 TPTSIAKQKGRRIATRYNRRGRGKGVK 151