Miyakogusa Predicted Gene

Lj1g3v1932810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1932810.1 Non Chatacterized Hit- tr|I1MW23|I1MW23_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,34.56,0.000000000006,FAR1,FAR1 DNA binding domain,CUFF.28193.1
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g21790.1                                                        75   3e-14
Glyma03g22420.1                                                        72   5e-13
Glyma16g07990.1                                                        70   1e-12
Glyma10g00380.1                                                        65   3e-11
Glyma09g01540.1                                                        61   9e-10
Glyma15g15450.1                                                        58   5e-09
Glyma15g15450.2                                                        58   6e-09
Glyma09g04400.1                                                        57   1e-08
Glyma14g36720.1                                                        50   2e-06

>Glyma17g21790.1 
          Length = 556

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 10/136 (7%)

Query: 69  KVSEVENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEVKFLPAY 128
           KV E+E +R +K+SRCNC +K+ + KR IGF E+WVV  F N HNH+LLDDKEV  +   
Sbjct: 41  KVIELERKRNKKSSRCNCSAKLGIAKREIGFKEQWVVTCFDNTHNHKLLDDKEVHHILLL 100

Query: 129 PQ-SCILQFLMLVLDSEQMIFESLRRNFIFSVLIAAMFVSQEVAIA----ATTFFKYCTA 183
            +  C +  ++ V++ E+ +  S   +  F       F+  +  I     A+   K C +
Sbjct: 101 SKVGCPISLIIRVIELEKGMDTS---HLPFLKKDIRNFIQSQSGIGREKDASKVLKLCKS 157

Query: 184 --TVVKLFRFYFMAVE 197
              +   F +YF   E
Sbjct: 158 LKDIDDAFHYYFTIDE 173


>Glyma03g22420.1 
          Length = 117

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query: 69  KVSEVENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEV 122
           KV E+E QR R +SRCNC +K+ + KR IGF+E+WVV    N +NHELLDD+EV
Sbjct: 64  KVIELERQRNRNSSRCNCSTKLWIAKREIGFEEQWVVTCLDNTYNHELLDDREV 117


>Glyma16g07990.1 
          Length = 79

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 42/59 (71%)

Query: 66  KQSKVSEVENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEVKF 124
           KQ KV E+E Q+ +KTSRCNC +++++ KR    +EKW+V  F N HNHELLD+K   F
Sbjct: 12  KQCKVIELERQKNQKTSRCNCSARILIAKRKSDIEEKWIVTGFNNSHNHELLDEKRFGF 70


>Glyma10g00380.1 
          Length = 679

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 71  SEVENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEVKFLPAY 128
           +E + QR RK+SRC C + M ++K T     +W V  F NHHNHELL+  +V+FLPAY
Sbjct: 109 TESKPQRNRKSSRCGCQAYMRISKTTEFGAPEWRVTGFANHHNHELLEPNQVRFLPAY 166


>Glyma09g01540.1 
          Length = 730

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 69  KVSEVENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEVKFLPAY 128
           K    E+ R RK+ RC C +KM ++K  +    +W V  F N HNHELL+D +V+ LPAY
Sbjct: 111 KKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAY 170


>Glyma15g15450.1 
          Length = 758

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 65  PKQSKVSEVENQRKRKTSRCNCGSKMVVTKRTIGFD-EKWVVKYFYNHHNHELLDDKEVK 123
           P+     + + QR RK+SRC C + M + KR+  FD  +W V  F N HNHELL   EV+
Sbjct: 100 PQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRS-DFDVPEWRVTGFRNIHNHELLKSNEVR 158

Query: 124 FLPAY 128
            LPAY
Sbjct: 159 LLPAY 163


>Glyma15g15450.2 
          Length = 327

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 65  PKQSKVSEVENQRKRKTSRCNCGSKMVVTKRTIGFD-EKWVVKYFYNHHNHELLDDKEVK 123
           P+     + + QR RK+SRC C + M + KR+  FD  +W V  F N HNHELL   EV+
Sbjct: 100 PQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRS-DFDVPEWRVTGFRNIHNHELLKSNEVR 158

Query: 124 FLPAY 128
            LPAY
Sbjct: 159 LLPAY 163


>Glyma09g04400.1 
          Length = 692

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 65  PKQSKVSEVENQRKRKTSRCNCGSKMVVTKRTIGFD-EKWVVKYFYNHHNHELLDDKEVK 123
           P+     + + QR RK+SRC C + M + KR+  FD  +W V  F N HNHELL   EV 
Sbjct: 100 PQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRS-DFDVPEWRVTGFRNIHNHELLKSNEVH 158

Query: 124 FLPAY 128
            LPAY
Sbjct: 159 LLPAY 163


>Glyma14g36720.1 
          Length = 71

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 4/49 (8%)

Query: 74  ENQRKRKTSRCNCGSKMVVTKRTIGFDEKWVVKYFYNHHNHELLDDKEV 122
           +N+R RK  R      ++     I F+EKWVVKYF N HNHELLDDK++
Sbjct: 9   KNERMRKIHRVFIKGNLI----KIDFEEKWVVKYFNNIHNHELLDDKKI 53