Miyakogusa Predicted Gene

Lj1g3v1931410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931410.1 Non Chatacterized Hit- tr|K3XDP0|K3XDP0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000007,44.9,2e-18,seg,NULL,
gene.Ljchr1_pseudomol_20120830.path1.gene4593.1
         (292 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07740.1                                                       225   5e-59
Glyma04g07640.1                                                       219   3e-57
Glyma17g30240.1                                                       219   3e-57

>Glyma06g07740.1 
          Length = 1971

 Score =  225 bits (573), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/302 (45%), Positives = 177/302 (58%), Gaps = 16/302 (5%)

Query: 1   MKRVSREEAAVRMXXXXXXXXXXXXXXGYFVSGQHCGPSQGDD-LEEIGSHSIEAAGSRP 59
           ++RV+REEAA +               GYFVS ++CGPS+GDD L+EI +HS+    S+ 
Sbjct: 145 VRRVAREEAAAKYVRERDDAAREAAEMGYFVSEKNCGPSKGDDDLKEIATHSVGGTNSKS 204

Query: 60  FFCTNE-GKHDHHIMDTDIDYDMNHADLEKSFGVKFPGSGLNSWSRVMKGCWEHRFKRKA 118
           FFC  E  +H H  + T +DYDM HADLE+SF VKFP  GL  W RV+KG  +H+FK KA
Sbjct: 205 FFCMKEVEQHGHRCVGTGVDYDMKHADLEESFRVKFPEKGLKFWKRVIKGHRKHKFKPKA 264

Query: 119 TRSDISASGVALRRRILECSALAAHTYFCDRDQSHGKFGGPSTSSGCFHSINHGTHLVNS 178
            RSDISASG+ALR+RILE  A AA+ YF  R QSHGKF  P +SSGCFH+ +H   LV S
Sbjct: 265 KRSDISASGIALRKRILERGAFAANAYF--RSQSHGKFEQPLSSSGCFHARDHDRQLVKS 322

Query: 179 EVDRRIPESVASXXXXXXXXXXXXTQSTDLETWSPSVNENVSDHSDCLKTVSDLNLQTRG 238
             D +   SVAS            TQ  DL  WSPS NEN+++H++    +S    +  G
Sbjct: 323 --DDKNDVSVASGDDNRNGDHRNGTQFRDLGVWSPSANENINEHANA--NISTEKKEELG 378

Query: 239 ESNCESNEDVAE---RVDGVNVLQSEGRTNTLPITLDSVHFR-----GATVMLLAYGDRE 290
                S  DV+    + D V+V  S        +  +++  +     GATVMLL YGDRE
Sbjct: 379 LHVAHSPIDVSATRGQRDLVSVKPSSLLAAYFHVPFETLIMKFGLNSGATVMLLTYGDRE 438

Query: 291 VR 292
           VR
Sbjct: 439 VR 440


>Glyma04g07640.1 
          Length = 1768

 Score =  219 bits (558), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 159/258 (61%), Gaps = 7/258 (2%)

Query: 1   MKRVSREEAAVRMXXXXXXXXXXXXXXGYFVSGQHCGPSQGDD-LEEIGSHSIEAAGSRP 59
           ++RV+REEAA +               GYFVS ++CGPS+GDD L+EI +HS+    S+ 
Sbjct: 193 VRRVAREEAAAKHVRDRDDAAREAAEMGYFVSEKNCGPSKGDDNLKEIATHSVGGTNSKG 252

Query: 60  FFCTNE-GKHDHHIMDTDIDYDMNHADLEKSFGVKFPGSGLNSWSRVMKGCWEHRFKRKA 118
           FFC  +  +H H  +DT +DYDM HADLE+SF VKFP  GL  W RV+KG  +H+FK+KA
Sbjct: 253 FFCMKKVEQHGHRCVDTGVDYDMKHADLEESFRVKFPEKGLKFWKRVIKGHRKHKFKQKA 312

Query: 119 TRSDISASGVALRRRILECSALAAHTYFCDRDQSHGKFGGPSTSSGCFHSINHGTHLVNS 178
            RSDISASG+ALR+RILE  A AA+ YF    QSHG F  P +SSGCFHS +H    V S
Sbjct: 313 KRSDISASGIALRKRILERGAFAANAYF--HSQSHGMFEHPLSSSGCFHSRDHDRQWVKS 370

Query: 179 EVDRRIPESVASXXXXXXXXXXXXTQSTDLETWSPSVNENVSDHSDCLKTVSDLNLQTR- 237
           + D+    SVAS            TQ  DL  WSPS NEN++ +S  L    DL+ QTR 
Sbjct: 371 DFDKN-AVSVASGDDNRNDDNRNGTQFRDLGVWSPSANENINGNSKDLNFFGDLSSQTRE 429

Query: 238 -GESNCESNEDVAERVDG 254
               N +S+EDVAE  + 
Sbjct: 430 SKHENLQSSEDVAEHANA 447



 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 43/58 (74%)

Query: 235 QTRGESNCESNEDVAERVDGVNVLQSEGRTNTLPITLDSVHFRGATVMLLAYGDREVR 292
           + + E + +    VAE VDGV+VLQSE  T  LP+TLDSV FRGATVMLL YGDREVR
Sbjct: 524 KLKSEMSLKVEGTVAENVDGVDVLQSEDLTKILPVTLDSVQFRGATVMLLTYGDREVR 581


>Glyma17g30240.1 
          Length = 2086

 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/327 (41%), Positives = 178/327 (54%), Gaps = 38/327 (11%)

Query: 2   KRVSREEAAVRMXXXXXXXXXXXXXXGYFVSGQHCGPSQGDD-LEEIGSHSIEAAGSRPF 60
           +R++REEA  +               GYFVS + CG S+GDD L+EI + S+E+  S PF
Sbjct: 247 RRLAREEAFAQWERERDGAAREAAEVGYFVSERSCGLSKGDDGLKEIETRSLESTESAPF 306

Query: 61  FCTNEGKHDHHIMDTDIDYDMNHADLEKSFGVKFPGSGLNSWSRVMKGCWEHRFKRKATR 120
           FC N+GKHDH +MD  ++YD  H  LEKSFGV+FPG GL  WSRV+ G  +H+  RKA  
Sbjct: 307 FCMNDGKHDHWLMDKGVNYDTKHTALEKSFGVRFPGLGLRFWSRVISGLRKHKLNRKANG 366

Query: 121 SDISASGVALRRRILECSALAAHTYFCDRDQSHGKFGGPSTSSGCFHSINHGTHL---VN 177
           S+I ASG A+++ ILE SA AAH YFCD  Q   KF  PS+ S  +  ++H  HL   VN
Sbjct: 367 SNIFASGGAIKKIILERSASAAHAYFCD--QPQWKFEEPSSPSESYGFMSHDMHLSPLVN 424

Query: 178 SEVDRR--IPESVASXXXXXXXXXXXXTQSTD--------------LETWSPSVNENVSD 221
             V  +    + V               QS+D               E + P V EN  D
Sbjct: 425 ENVSSQSDYLKFVCDSTLRTRESEIENLQSSDDVAKPANPNSSTVKNEEFVPYVAENQID 484

Query: 222 HSDCLK------TVSDLNL----------QTRGESNCESNEDVAERVDGVNVLQSEGRTN 265
            +D            DL L            + +   +  + V+E VDGV+ +QSEG T 
Sbjct: 485 DNDSSSGGQQGLPSEDLELISHFLSGSIEMLKSDVGLKVEDIVSEHVDGVDFVQSEGVTK 544

Query: 266 TLPITLDSVHFRGATVMLLAYGDREVR 292
           TLP+TLDSVHFRGAT+MLLAYGD+EVR
Sbjct: 545 TLPVTLDSVHFRGATLMLLAYGDKEVR 571