Miyakogusa Predicted Gene

Lj1g3v1930240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1930240.1 Non Chatacterized Hit- tr|C6SXN0|C6SXN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32074 PE,70.15,4e-18,
,NODE_42115_length_221_cov_358.755646.path1.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g24900.1                                                        98   2e-21
Glyma03g24900.2                                                        98   2e-21
Glyma07g12980.1                                                        97   4e-21

>Glyma03g24900.1 
          Length = 134

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 4/68 (5%)

Query: 1  MASTFVTLPTPFLHKTSTSVPSTSFSNKRLPFLKRNSLKVNAVATKWEPAKVVPQADRVL 60
          MASTF+TLPTPFLHKT+    + SFSNKR  FL+R+SLK++A+  KWEP KVVPQADRVL
Sbjct: 1  MASTFLTLPTPFLHKTN----AISFSNKRPSFLQRSSLKIHAITKKWEPTKVVPQADRVL 56

Query: 61 IRLEELAQ 68
          IRLEEL+ 
Sbjct: 57 IRLEELSD 64


>Glyma03g24900.2 
          Length = 105

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 4/68 (5%)

Query: 1  MASTFVTLPTPFLHKTSTSVPSTSFSNKRLPFLKRNSLKVNAVATKWEPAKVVPQADRVL 60
          MASTF+TLPTPFLHKT+    + SFSNKR  FL+R+SLK++A+  KWEP KVVPQADRVL
Sbjct: 1  MASTFLTLPTPFLHKTN----AISFSNKRPSFLQRSSLKIHAITKKWEPTKVVPQADRVL 56

Query: 61 IRLEELAQ 68
          IRLEEL+ 
Sbjct: 57 IRLEELSD 64


>Glyma07g12980.1 
          Length = 134

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 57/68 (83%), Gaps = 4/68 (5%)

Query: 1  MASTFVTLPTPFLHKTSTSVPSTSFSNKRLPFLKRNSLKVNAVATKWEPAKVVPQADRVL 60
          MASTF+TLPTPFLHKT+    + +FS+KR  FL+R+SLK+NA+  KWEP KVVPQADRVL
Sbjct: 1  MASTFLTLPTPFLHKTN----AITFSDKRPSFLQRSSLKINAITKKWEPTKVVPQADRVL 56

Query: 61 IRLEELAQ 68
          +RLEEL+ 
Sbjct: 57 VRLEELSD 64