Miyakogusa Predicted Gene

Lj1g3v1915000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1915000.1 Non Chatacterized Hit- tr|I1JUH0|I1JUH0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36435
PE,62.65,0.00000000001,seg,NULL,BW626526.path1.1
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g07430.2                                                        55   1e-08
Glyma06g07550.2                                                        52   1e-07
Glyma04g07430.1                                                        51   3e-07
Glyma06g07550.1                                                        47   3e-06

>Glyma04g07430.2 
          Length = 369

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 40/81 (49%), Gaps = 15/81 (18%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASLTTI 60
          MEE EGVNC                       +YRQC+            LVRHASL   
Sbjct: 1  MEEIEGVNCCSESESRSSSETRPPNPN---PPSYRQCK------------LVRHASLMKT 45

Query: 61 KLSEVCSEPGNVTEDCQSDFL 81
          KLS+V +EPG+VTEDCQSDF 
Sbjct: 46 KLSDVSAEPGHVTEDCQSDFF 66


>Glyma06g07550.2 
          Length = 369

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 39/81 (48%), Gaps = 15/81 (18%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASLTTI 60
          MEE EGVNC                       +YRQC+            LVRHASL   
Sbjct: 1  MEEIEGVNCCSESESRSSSVTRPPNPN---PPSYRQCK------------LVRHASLMNT 45

Query: 61 KLSEVCSEPGNVTEDCQSDFL 81
          KLS+V +EP +VTEDCQSDF 
Sbjct: 46 KLSDVSAEPEHVTEDCQSDFF 66


>Glyma04g07430.1 
          Length = 370

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 40/82 (48%), Gaps = 16/82 (19%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASL-TT 59
          MEE EGVNC                       +YRQC+            LVRHASL   
Sbjct: 1  MEEIEGVNCCSESESRSSSETRPPNPN---PPSYRQCK------------LVRHASLQMK 45

Query: 60 IKLSEVCSEPGNVTEDCQSDFL 81
           KLS+V +EPG+VTEDCQSDF 
Sbjct: 46 TKLSDVSAEPGHVTEDCQSDFF 67


>Glyma06g07550.1 
          Length = 370

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 39/82 (47%), Gaps = 16/82 (19%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASL-TT 59
          MEE EGVNC                       +YRQC+            LVRHASL   
Sbjct: 1  MEEIEGVNCCSESESRSSSVTRPPNPN---PPSYRQCK------------LVRHASLKMN 45

Query: 60 IKLSEVCSEPGNVTEDCQSDFL 81
           KLS+V +EP +VTEDCQSDF 
Sbjct: 46 TKLSDVSAEPEHVTEDCQSDFF 67