Miyakogusa Predicted Gene

Lj1g3v1900600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1900600.1 Non Chatacterized Hit- tr|I1M0P2|I1M0P2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37461 PE,81.3,0,Ribosome
recycling factor, RRF,Ribosome recycling factor domain; no
description,NULL; RRF,Ribosome r,CUFF.28102.1
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26300.1                                                       428   e-120
Glyma15g37240.1                                                       234   5e-62
Glyma02g16590.1                                                       124   9e-29
Glyma02g16590.2                                                       120   1e-27
Glyma10g03240.2                                                       117   1e-26
Glyma10g03240.1                                                       116   2e-26
Glyma02g16590.3                                                       109   3e-24

>Glyma13g26300.1 
          Length = 261

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/262 (82%), Positives = 232/262 (88%), Gaps = 3/262 (1%)

Query: 1   MSGYIRRAISCQNLLQLRNSAF-HVCDVPGAIQIRALESNRVSTLPAAANFIVESRRAFA 59
           MSGY+RRA S +N+L LRNS     CDV   IQ+   +SNRV TLPA  NF+ ESRRAFA
Sbjct: 2   MSGYVRRAFSYRNMLWLRNSGVVRGCDVWSPIQM--CDSNRVLTLPATPNFVAESRRAFA 59

Query: 60  KGRKSKDDAGMSTIEVPLVLGPTIKANAVSQMEAAISALSTELSKLRTGRASPGMLDHII 119
           KGRKSKD+ G STIEVP   GPTIKANAVSQMEAA++ALSTELSKLRTGRASPGMLDHII
Sbjct: 60  KGRKSKDEGGASTIEVPPNAGPTIKANAVSQMEAAMAALSTELSKLRTGRASPGMLDHII 119

Query: 120 VETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIAA 179
           VET G+K+PL R+A+VSV+DPKTLSVNPYDP+TLKQLENAIVSSPLGLNPK+DGERLIA 
Sbjct: 120 VETSGLKMPLNRLAVVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGLNPKSDGERLIAV 179

Query: 180 IPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKEVDDL 239
           IPPLTKEHMQAM KLV KSCEDARQSIRRARQKAMDAIKKL SSLPKDDIKRLEKEVDDL
Sbjct: 180 IPPLTKEHMQAMTKLVAKSCEDARQSIRRARQKAMDAIKKLYSSLPKDDIKRLEKEVDDL 239

Query: 240 TKKFIKTAEDTCKAKEKEISQG 261
           TKKFIK+AED CKAKEKEISQG
Sbjct: 240 TKKFIKSAEDICKAKEKEISQG 261


>Glyma15g37240.1 
          Length = 185

 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/196 (67%), Positives = 149/196 (76%), Gaps = 18/196 (9%)

Query: 66  DDAGMSTIEVPLVLGPTIKANAVSQMEAAISALS--TELSKLRTG--RASPG---MLDHI 118
           D+ G+ TIEVP  +GPTIKANAVSQMEAA++AL+  +E +  R G  R+S     MLDHI
Sbjct: 1   DEGGVGTIEVPPNVGPTIKANAVSQMEAAMAALAIPSEQATYRKGIPRSSVSLDRMLDHI 60

Query: 119 IVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQLENAIVSSPLGLNPKADGERLIA 178
           IVET G+K+PL  + +V V+D KTL           Q E  IVSSPLGLNPK+DGERLIA
Sbjct: 61  IVETSGLKMPLNWLVVVFVLDQKTL-----------QRECHIVSSPLGLNPKSDGERLIA 109

Query: 179 AIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSSLPKDDIKRLEKEVDD 238
            I PLTKEH+QAM KLV KSCEDA QSIRRA+QKAMDAIKKL SSLPKDDIKRLEKEVDD
Sbjct: 110 VILPLTKEHIQAMTKLVAKSCEDASQSIRRAQQKAMDAIKKLYSSLPKDDIKRLEKEVDD 169

Query: 239 LTKKFIKTAEDTCKAK 254
           LTKK  KTAED CK K
Sbjct: 170 LTKKISKTAEDVCKVK 185


>Glyma02g16590.1 
          Length = 261

 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 6/217 (2%)

Query: 44  LPAAANFIVESRRAFAKGRKSKDDAGMSTIEVPLVLGPTIKANAVSQMEAAISALSTELS 103
           LP A  F +  R   +KGR +   A   TIE        I+ +A ++M+  I  + T  S
Sbjct: 46  LPRA--FALSPRPLLSKGRTTLVRAA--TIEEIEAEKAAIEKDAKTRMDRTIDNVRTNFS 101

Query: 104 KLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQLENAIVSS 163
            +RTGRA+P MLD I VE  G  + L  IA +S  D  +L V PYD  +LK +E AIVSS
Sbjct: 102 SIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSS 161

Query: 164 PLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSS 223
            LG+ P  DGE +  +IP LT +  + ++K+V K  E+ + ++R  R+ A+ A  KL   
Sbjct: 162 DLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEKE 221

Query: 224 --LPKDDIKRLEKEVDDLTKKFIKTAEDTCKAKEKEI 258
             L +D++K L  ++  LT +++K  +   K KEKE+
Sbjct: 222 KKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKEL 258


>Glyma02g16590.2 
          Length = 260

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 7/217 (3%)

Query: 44  LPAAANFIVESRRAFAKGRKSKDDAGMSTIEVPLVLGPTIKANAVSQMEAAISALSTELS 103
           LP A  F +  R   +KGR +   A   TIE        I+ +A ++M+  I  + T  S
Sbjct: 46  LPRA--FALSPRPLLSKGRTTLVRAA--TIEEIEAEKAAIEKDAKTRMDRTIDNVRTNFS 101

Query: 104 KLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQLENAIVSS 163
            +RTGRA+P MLD I VE  G  + L  IA +S  D  +L V PYD  +LK +E AIVSS
Sbjct: 102 SIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSS 161

Query: 164 PLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSS 223
            LG+ P  DGE +  +IP LT +  + ++K+V K  E+ + ++R  R+ A+ A  KL   
Sbjct: 162 DLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEKE 221

Query: 224 --LPKDDIKRLEKEVDDLTKKFIKTAEDTCKAKEKEI 258
             L +D++K L  ++  LT +++K  +   K KEKE+
Sbjct: 222 KKLSEDNVKDLSSDL-QLTDEYMKKVDTIFKQKEKEL 257


>Glyma10g03240.2 
          Length = 173

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 2/170 (1%)

Query: 91  MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 150
           M+  I  + T  S +RTGRA+P MLD I VE  G  + L  IA +S  D  +L V PYD 
Sbjct: 1   MDRTIDNVRTNFSSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDK 60

Query: 151 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 210
            +LK +E  IVSS LG+ P  DGE +   IP LT +  + ++K+V K  E+ + ++R  R
Sbjct: 61  SSLKAIEKTIVSSDLGMTPNNDGESIQLRIPQLTSDRRKELSKIVAKQAEEGKVALRNIR 120

Query: 211 QKAMDAIKKLNSS--LPKDDIKRLEKEVDDLTKKFIKTAEDTCKAKEKEI 258
           + A+ A  KL     L +D++K L  ++  LT +++K  +   K KEKE+
Sbjct: 121 RDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKEL 170


>Glyma10g03240.1 
          Length = 204

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 2/173 (1%)

Query: 91  MEAAISALSTELSKLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDP 150
           M+  I  + T  S +RTGRA+P MLD I VE  G  + L  IA +S  D  +L V PYD 
Sbjct: 1   MDRTIDNVRTNFSSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDK 60

Query: 151 QTLKQLENAIVSSPLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRAR 210
            +LK +E  IVSS LG+ P  DGE +   IP LT +  + ++K+V K  E+ + ++R  R
Sbjct: 61  SSLKAIEKTIVSSDLGMTPNNDGESIQLRIPQLTSDRRKELSKIVAKQAEEGKVALRNIR 120

Query: 211 QKAMDAIKKLNSS--LPKDDIKRLEKEVDDLTKKFIKTAEDTCKAKEKEISQG 261
           + A+ A  KL     L +D++K L  ++  LT +++K  +   K KEK ++ G
Sbjct: 121 RDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKLMTDG 173


>Glyma02g16590.3 
          Length = 247

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 16/215 (7%)

Query: 44  LPAAANFIVESRRAFAKGRKSKDDAGMSTIEVPLVLGPTIKANAVSQMEAAISALSTELS 103
           LP A  F +  R   +KGR +   A   TIE        I+ +A ++M+  I  + T  S
Sbjct: 46  LPRA--FALSPRPLLSKGRTTLVRAA--TIEEIEAEKAAIEKDAKTRMDRTIDNVRTNFS 101

Query: 104 KLRTGRASPGMLDHIIVETGGVKIPLVRIALVSVIDPKTLSVNPYDPQTLKQLENAIVSS 163
            +RTGRA+P MLD I VE  G  + L  IA +S  D  +L V PYD  +LK +E AIVSS
Sbjct: 102 SIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSS 161

Query: 164 PLGLNPKADGERLIAAIPPLTKEHMQAMNKLVTKSCEDARQSIRRARQKAMDAIKKLNSS 223
            LG+ P  DGE +  +IP LT +  +            A ++IRR   KA D ++K    
Sbjct: 162 DLGMTPNNDGELIRLSIPQLTSDRRKV-----------ALRNIRRDALKAYDKLEK-EKK 209

Query: 224 LPKDDIKRLEKEVDDLTKKFIKTAEDTCKAKEKEI 258
           L +D++K L  ++  LT +++K  +   K KEKE+
Sbjct: 210 LSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKEL 244