Miyakogusa Predicted Gene

Lj1g3v1788380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788380.1 tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_1,42.66,8e-19,COPPER TRANSPORTER,NULL; SOLUTE CARRIER
FAMILY 31 (COPPER TRANSPORTERS),Ctr copper transporter;
seg,,CUFF.27949.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g06000.1                                                       183   5e-47
Glyma04g05990.1                                                       154   3e-38
Glyma14g12680.1                                                       153   6e-38
Glyma18g41640.1                                                        72   2e-13
Glyma07g17060.1                                                        72   2e-13
Glyma18g41530.1                                                        65   3e-11
Glyma11g14290.1                                                        64   5e-11
Glyma01g26360.1                                                        62   2e-10

>Glyma06g06000.1 
          Length = 143

 Score =  183 bits (465), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 100/143 (69%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTFYW +KV +L DSWKT+ WT Y+L+LLAC ++A FYQ LENRRIRLKL  +GKP 
Sbjct: 1   MMHMTFYWSRKVNLLIDSWKTNDWTDYLLTLLACLVVAAFYQFLENRRIRLKLIGSGKPF 60

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
           P EIE PL+RR               + LFG+SS +GYLLML+VMSFNGGVFVAIVVGLA
Sbjct: 61  PAEIEAPLLRRKLAGNRVKVGVKVAGAFLFGLSSAVGYLLMLSVMSFNGGVFVAIVVGLA 120

Query: 121 FGYFFFRXXXXXXXXXXXXCACA 143
            GYFFFR            CACA
Sbjct: 121 VGYFFFRNEGEDSLVVDTSCACA 143


>Glyma04g05990.1 
          Length = 143

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/143 (60%), Positives = 99/143 (69%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTFYW +KV +L DSWKT+ WT Y+++LLAC ++A FYQ LENRRIRLKL  AG P 
Sbjct: 1   MMHMTFYWSRKVNLLIDSWKTNDWTEYLITLLACLVVAAFYQFLENRRIRLKLIGAGNPF 60

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
           P EIE PL+RR               + LFG+SS IGYLLML+VMSFNGGVFVA+VVGLA
Sbjct: 61  PAEIEAPLLRRKLAGNRAKVGVKVAGAFLFGLSSAIGYLLMLSVMSFNGGVFVAVVVGLA 120

Query: 121 FGYFFFRXXXXXXXXXXXXCACA 143
            GYFFFR            CACA
Sbjct: 121 VGYFFFRNEGEDSLVVDTSCACA 143


>Glyma14g12680.1 
          Length = 147

 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 98/148 (66%), Gaps = 6/148 (4%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGK-- 58
           MMHMTFYWGKKVTIL DSWKTDSWTSY LSLLAC + A  YQ LENRRIRLKL A G+  
Sbjct: 1   MMHMTFYWGKKVTILIDSWKTDSWTSYFLSLLACLVAAALYQYLENRRIRLKLLAGGRRP 60

Query: 59  -PVPLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVV 117
            P P EI  PL+R                ++LFGV+S IGYLLMLAVMSFNGGVF+AI V
Sbjct: 61  SPAP-EIRAPLLRWGVAGDKEKLGVKFAEAVLFGVNSAIGYLLMLAVMSFNGGVFLAIAV 119

Query: 118 GLAFGYFFFRXXXXXXX--XXXXXCACA 143
           GL  GYFFFR              CACA
Sbjct: 120 GLTIGYFFFRNEGENDALVVDNNSCACA 147


>Glyma18g41640.1 
          Length = 130

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 20/125 (16%)

Query: 2   MHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVP 61
           +H TFYWG KV ILF  W  DS   Y ++LL  F +AV  + L    I +KL   G    
Sbjct: 9   IHTTFYWGHKVDILFRCWPGDSAAMYAVALLLVFFMAVLVEWLSFTNI-VKLKPGGSN-- 65

Query: 62  LEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAF 121
            ++   L++                + L+GV SG+ Y++MLAVMSFNGGVFV  + G   
Sbjct: 66  -DVVGGLLK----------------TGLYGVRSGLSYMVMLAVMSFNGGVFVVAICGHVI 108

Query: 122 GYFFF 126
           G+  F
Sbjct: 109 GFLIF 113


>Glyma07g17060.1 
          Length = 140

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 20/125 (16%)

Query: 2   MHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVP 61
           +H TFYWG KV ILF  W  DS   Y ++LL  F +AV  + L    I +KL + G    
Sbjct: 9   IHTTFYWGHKVDILFRCWPGDSTAMYAVALLLVFFMAVLVEWLSFTNI-VKLKSRGSN-- 65

Query: 62  LEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAF 121
            ++   L++                + L+GV SG+ Y++MLAVMSFNGGVFV  + G   
Sbjct: 66  -DVVGGLLK----------------TGLYGVRSGLSYMVMLAVMSFNGGVFVVAICGHVI 108

Query: 122 GYFFF 126
           G+  F
Sbjct: 109 GFLIF 113


>Glyma18g41530.1 
          Length = 146

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 23/124 (18%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMH +FYWGK   +LF  W  ++   YIL+L+  F +A+  +VL N+ +        KP 
Sbjct: 22  MMHNSFYWGKDAIVLFPRWPENNVGMYILALIFVFFLAMAVEVLSNQPLL-------KPG 74

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
              +   LI+                  LF +S    Y++MLAVMSFN G+F+A VVG  
Sbjct: 75  TSPLVGGLIQAGVH--------------LFRIS--FVYMVMLAVMSFNAGIFIAAVVGHT 118

Query: 121 FGYF 124
            G+F
Sbjct: 119 LGFF 122


>Glyma11g14290.1 
          Length = 177

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 23/119 (19%)

Query: 6   FYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVPLEIE 65
           F+WGK   ILF++W       Y+L+L+  F++AV  ++L + R         KP    + 
Sbjct: 60  FFWGKDADILFNNWPGGKSGMYVLALVFVFVMAVLVELLSHTRFI-------KPGSNHVV 112

Query: 66  TPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAFGYF 124
           + LI+                ++L  +  G+ YL+MLA+MSFNGGVF+  V+G A G+F
Sbjct: 113 SGLIK----------------TLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFF 155


>Glyma01g26360.1 
          Length = 144

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 23/126 (18%)

Query: 2   MHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVP 61
           MHM+ YWGK   +LF  W   S   YIL++L  F +A+  +V+ N           KP  
Sbjct: 22  MHMSLYWGKDAIVLFSGWPKHSVGHYILAILFVFFLAIIAEVVSN-----------KPNI 70

Query: 62  LEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAF 121
                P+I                   +F +S  + YL+MLAVMSFN G+F+A V G   
Sbjct: 71  KRGTNPIIGGLAQATFY----------VFRIS--LLYLVMLAVMSFNLGIFIAAVAGHTL 118

Query: 122 GYFFFR 127
           G+F  +
Sbjct: 119 GFFLAK 124