Miyakogusa Predicted Gene

Lj1g3v1788200.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788200.2 tr|I1JK05|I1JK05_SOYBN Eukaryotic translation
initiation factor 3 subunit B OS=Glycine max PE=3 SV=1,83.93,0,TolB,
C-terminal domain,NULL; eIF2A,Translation initiation factor 2A, beta
propellor-like domain; SU,CUFF.27930.2
         (224 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g00470.1                                                       334   4e-92
Glyma07g14870.1                                                       333   1e-91
Glyma04g06080.1                                                       265   4e-71
Glyma04g06290.1                                                       130   9e-31
Glyma07g33000.1                                                        57   1e-08
Glyma02g15500.1                                                        57   2e-08
Glyma02g15500.2                                                        56   3e-08

>Glyma03g00470.1 
          Length = 718

 Score =  334 bits (857), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 165/224 (73%), Positives = 178/224 (79%), Gaps = 1/224 (0%)

Query: 1   MRTAQKAGWVSKLTALKGKQANALFWSPAGRFIVVAGLKGFNGQLEFYNVDELETMVTAE 60
           MRT Q +  VSKLT LKGKQANALFWSPAGR+IV+AGLKGFNGQLEFYNVDELETM TAE
Sbjct: 496 MRTGQNSR-VSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAE 554

Query: 61  HFMTTDIEWDPTGRYVTTSVTSVHDVENGFNIWSFSGKHLYRIMKDHFFQFSWRARPPSF 120
           HFM TDIEWDPTGRYV T+VTSVH++ENGFNIWSF+GKHLYRI+KDHFFQF WR RPPSF
Sbjct: 555 HFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSF 614

Query: 121 LTPEKEEEIANNLKKYSKKYEAEDQDESMLLSEQEQEKCRMLKEEWDMWVNEWKWMHEEE 180
           LTPEKEEEIA NLKKYSKKYEAEDQD S+LLSEQE+EK RMLKEEWD WVNEWK +HEEE
Sbjct: 615 LTPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWDKWVNEWKRIHEEE 674

Query: 181 KLQREQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHFEYGQE 224
            LQR++ R                            LH EYGQE
Sbjct: 675 SLQRQKLRDGEASDEEEEYEAKDIEVEEVIDLTEEVLHLEYGQE 718


>Glyma07g14870.1 
          Length = 718

 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 164/224 (73%), Positives = 177/224 (79%), Gaps = 1/224 (0%)

Query: 1   MRTAQKAGWVSKLTALKGKQANALFWSPAGRFIVVAGLKGFNGQLEFYNVDELETMVTAE 60
           MRT Q +  VSKL  LKGKQANALFWSPAGR+IV+AGLKGFNGQLEFYNVDELETM TAE
Sbjct: 496 MRTGQNSR-VSKLITLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAE 554

Query: 61  HFMTTDIEWDPTGRYVTTSVTSVHDVENGFNIWSFSGKHLYRIMKDHFFQFSWRARPPSF 120
           HFM TDIEWDPTGRYV T+VTSVH++ENGFNIWSF+GKHLYRI+KDHFFQF WR RPPSF
Sbjct: 555 HFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSF 614

Query: 121 LTPEKEEEIANNLKKYSKKYEAEDQDESMLLSEQEQEKCRMLKEEWDMWVNEWKWMHEEE 180
           LTPEKEEEIA NLKKYSKKYEAEDQD S+LLSEQE+EK RMLKEEWD WVNEWK +HEEE
Sbjct: 615 LTPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWDKWVNEWKQIHEEE 674

Query: 181 KLQREQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHFEYGQE 224
            LQR++ R                            LH EYGQE
Sbjct: 675 SLQRQKLRDGEASDEEEEYEAKDIEVEEVIDVTKEVLHLEYGQE 718


>Glyma04g06080.1 
          Length = 698

 Score =  265 bits (676), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/191 (71%), Positives = 153/191 (80%), Gaps = 6/191 (3%)

Query: 1   MRTAQKAGWVSKLTALKGKQANALFWSPAGRFIVVAGLKGFNGQLEFYNVDELETMVTAE 60
           MRT Q +  VSKLT LKGKQANALFWSPAGR+IV+AGLKGFNGQLEFYNVDEL+TM TAE
Sbjct: 484 MRTGQNSQ-VSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELKTMATAE 542

Query: 61  HFMTTDIEWDPTGRYVTTSVTSVHDVENGFNI---WSFSGKHLYRIMKDHFFQFSWRARP 117
           HFM TDIEWDPTGRYV T+VTSVH++ENGF++   W  S       +      F WR RP
Sbjct: 543 HFMATDIEWDPTGRYVATAVTSVHEMENGFSMVFQWQTSISDSEGSLISGLDIFLWRPRP 602

Query: 118 PSFLTPEKEEEIANNLKKYSKKYEAEDQDESMLLSEQEQEKCRMLKEEWDMWVNEWKWMH 177
           PSFLTPEKEEEIA NLKKYS  YEAEDQD S+ LSEQE+EKCRMLKE+WD WVNEWK +H
Sbjct: 603 PSFLTPEKEEEIAKNLKKYS-IYEAEDQDVSLPLSEQEREKCRMLKEDWDKWVNEWKQIH 661

Query: 178 EEEKLQREQHR 188
            EE LQR++ R
Sbjct: 662 -EESLQRQKLR 671


>Glyma04g06290.1 
          Length = 576

 Score =  130 bits (328), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/139 (58%), Positives = 99/139 (71%), Gaps = 8/139 (5%)

Query: 29  AGRFIVVAGLKGFNGQLEFYNVDELETMVTAEHFMTTDIEWDPTGRYVTTS-----VTSV 83
           A +F+ +  +   NGQLEFYNVDELETM  AEHFM T +EWDPTGR++  S     VTSV
Sbjct: 404 ASKFLFL--VTCLNGQLEFYNVDELETMAMAEHFMATSVEWDPTGRFIVQSFSATWVTSV 461

Query: 84  HDVENGFNIWSFSGKHLYRIMKDH-FFQFSWRARPPSFLTPEKEEEIANNLKKYSKKYEA 142
           H++ENGFNI+    K +  +   H    F WR RPPS L+PEKEEE++ NLKKYSKKYEA
Sbjct: 462 HEMENGFNIYFCFKKGIGILTFLHGACYFLWRPRPPSPLSPEKEEEMSKNLKKYSKKYEA 521

Query: 143 EDQDESMLLSEQEQEKCRM 161
           EDQD SMLL EQ++ K R+
Sbjct: 522 EDQDVSMLLREQDRNKRRI 540


>Glyma07g33000.1 
          Length = 517

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 22  NALFWSPAGRFIVVAGLKGFNGQLEFYN-VDELETMVTAEHFMTTDIEWDPTGRYVTTSV 80
           N + W+P G+F+ +AG     G + F++ +D+ +   T   +  T  EW P G Y  T+ 
Sbjct: 320 NTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAEWSVTS-EWSPDGCYFMTAT 378

Query: 81  TSVH-DVENGFNIWSFSGKHLYRIMKDHFFQFSWRARPPS 119
           T+    V+NG  I+ ++G   ++ M D  +Q  W+   PS
Sbjct: 379 TAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPS 418


>Glyma02g15500.1 
          Length = 518

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 22  NALFWSPAGRFIVVAGLKGFNGQLEFYN-VDELETMVTAEHFMTTDIEWDPTGRYVTTSV 80
           N + W+P G+F+ +AG     G + F++ +D+ +   T   +  T  EW P G Y  T+ 
Sbjct: 320 NTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAEWSVTS-EWSPDGCYFMTAT 378

Query: 81  TSVH-DVENGFNIWSFSGKHLYRIMKDHFFQFSWRARPP 118
           T+    V+NG  I+ ++G   ++ M D  +Q  W+   P
Sbjct: 379 TAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPESP 417


>Glyma02g15500.2 
          Length = 510

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 22  NALFWSPAGRFIVVAGLKGFNGQLEFYN-VDELETMVTAEHFMTTDIEWDPTGRYVTTSV 80
           N + W+P G+F+ +AG     G + F++ +D+ +   T   +  T  EW P G Y  T+ 
Sbjct: 320 NTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAEWSVTS-EWSPDGCYFMTAT 378

Query: 81  TSVH-DVENGFNIWSFSGKHLYRIMKDHFFQFSWRARPP 118
           T+    V+NG  I+ ++G   ++ M D  +Q  W+   P
Sbjct: 379 TAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPESP 417