Miyakogusa Predicted Gene

Lj1g3v1788170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788170.1 tr|A8IS75|A8IS75_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_206257 PE=4
SV=1,36.05,7e-18,seg,NULL,CUFF.27927.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g05850.1                                                       314   5e-86
Glyma04g05860.1                                                       212   2e-55

>Glyma06g05850.1 
          Length = 229

 Score =  314 bits (805), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 176/229 (76%), Positives = 190/229 (82%), Gaps = 3/229 (1%)

Query: 1   MASLVTPAHVS-NCKPLLCSTSKARPVRCALSPPTWRESRRMXXXXXXXXXXXXXPNR-- 57
           MASL TPAHVS N KPL   + KA+ VRCA+SPPTWRE RR              PNR  
Sbjct: 1   MASLGTPAHVSSNKKPLHRWSWKAKRVRCAVSPPTWREGRRTVSLSLVLSHLLLIPNRDT 60

Query: 58  AEGGVFDKYVKRKKLDPLETYVPAVILTEFQFKDLEKTLEVDKPQFDLCRSLLRSGPAAS 117
           A    FDKYVKRKKLDPLE Y+PAVILTEFQ KDLEKTLE ++PQF LCRSLLRSGPAAS
Sbjct: 61  ALASPFDKYVKRKKLDPLEVYIPAVILTEFQIKDLEKTLEDEEPQFALCRSLLRSGPAAS 120

Query: 118 LRVNIRAVAQYASDSGNGKTAMNNVDDCLRSLEELDSLFLNASRNDPAASVKSMKAKIST 177
           LRVNIRAVAQYASDSGNGKTA N+VD+CLRSLEELDSL L+ASRNDP ASVKSMKAKI++
Sbjct: 121 LRVNIRAVAQYASDSGNGKTAFNDVDECLRSLEELDSLLLHASRNDPEASVKSMKAKINS 180

Query: 178 ALGALDSLLQTVPSDVLSKGKVIADSYRDQEDVETESLDPELKQLESVL 226
           ALGALDSLLQTVPSDVLSKGKVIADSYR+ ED ET SLDP+LKQLES+L
Sbjct: 181 ALGALDSLLQTVPSDVLSKGKVIADSYREPEDEETGSLDPDLKQLESIL 229


>Glyma04g05860.1 
          Length = 236

 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 152/238 (63%), Gaps = 36/238 (15%)

Query: 23  ARPVRCALSPPTWRESRRMXXXXXXXXXXXXXPNR--AEGGVFDKYVKRK--------KL 72
           A+ VRCA+SPPTWRE  R              PNR  A+   FDKYVK          KL
Sbjct: 1   AKRVRCAVSPPTWREGLRTVSLSLVISHLLLIPNRDAAQANPFDKYVKSTYSLNYILDKL 60

Query: 73  DPLETYVPAVILTEFQFKDLEKTLEV------------------------DKPQFDLCRS 108
             L  Y+  +   +     L  T  V                        ++PQF LCRS
Sbjct: 61  FDLRGYL--IYFLKLDMYQLSYTYRVSDQRTWIMPLSSCDMVCSNNNLKGEEPQFTLCRS 118

Query: 109 LLRSGPAASLRVNIRAVAQYASDSGNGKTAMNNVDDCLRSLEELDSLFLNASRNDPAASV 168
             RSGPAASLRVNIRAV QYA DSGNGKTA N+VD+CLRSLEELDSL L+ASRNDP ASV
Sbjct: 119 PSRSGPAASLRVNIRAVVQYAFDSGNGKTAFNDVDECLRSLEELDSLLLHASRNDPEASV 178

Query: 169 KSMKAKISTALGALDSLLQTVPSDVLSKGKVIADSYRDQEDVETESLDPELKQLESVL 226
           KSMK KI++ALGALDSLLQTVPSDVLSKG+VIADSYR+ ED ET SLDP+LKQLES+L
Sbjct: 179 KSMKTKINSALGALDSLLQTVPSDVLSKGEVIADSYREPEDEETGSLDPDLKQLESIL 236