Miyakogusa Predicted Gene

Lj1g3v1788160.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788160.1 tr|I7JWI7|I7JWI7_MARPO NDH subunit NdhU
OS=Marchantia polymorpha GN=ndhU PE=4 SV=1,34.05,2e-18,Chaperone
J-domain,Heat shock protein DnaJ, N-terminal; seg,NULL; no
description,Heat shock protein ,CUFF.27922.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g05820.1                                                       192   2e-49
Glyma04g05810.1                                                       192   2e-49

>Glyma06g05820.1 
          Length = 227

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/202 (54%), Positives = 128/202 (63%), Gaps = 10/202 (4%)

Query: 19  VPVYQSPKLGFLSTNCFHVKPRR--LCIRSSSDVSAETTDTEVES---IEVPKEPPSLIS 73
           +P  Q+PK+GF ST  F  KP+R  L IRSSS   AET+ TEV+S   IEVP+E  SLIS
Sbjct: 29  IPNPQAPKIGFSSTIAFTAKPQRRLLRIRSSS---AETSGTEVDSKSSIEVPEETSSLIS 85

Query: 74  ALNVERALRGLPITDADHYGRLGIPRGYPSNKVAVAYNNKVXXXXXXXXXXXXXXXXXXX 133
           ALNVE+ LRGLPITDADHYGRLGIPRG P   V  AYN KV                   
Sbjct: 86  ALNVEKILRGLPITDADHYGRLGIPRGCPFELVGGAYNIKVQELKSQNLEEDELEKKLEL 145

Query: 134 XXXXYTIMSSVEERRLYDWSLARTENTGRYNWPYEADIXXXXXXXXX--XXXXXDVGPTR 191
               YTI+SS EERR+YDWSLAR EN  ++ WP+E DI                DVGPTR
Sbjct: 146 LKESYTILSSEEERRIYDWSLARAENADKFVWPFEVDITQSKISEEDPPQLDPEDVGPTR 205

Query: 192 VVGFVFLGWIVISVVLSISLNL 213
           VVG+  LGWI++S+VLSI+LNL
Sbjct: 206 VVGYFLLGWIMLSIVLSIALNL 227


>Glyma04g05810.1 
          Length = 215

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/208 (54%), Positives = 132/208 (63%), Gaps = 7/208 (3%)

Query: 11  ICISGNNIVPVYQSPKLGFLSTNCFHVKPRRLCIRSSSDVSAETTDTEVES---IEVPKE 67
           +CI   NI P  Q+PK+GF ST  F  KPRR  +R  S  SAET+ TEV+S   IEVP+E
Sbjct: 10  VCIPAKNI-PTTQAPKIGFSSTIAFAAKPRRRLLRIRS-SSAETSGTEVDSETSIEVPEE 67

Query: 68  PPSLISALNVERALRGLPITDADHYGRLGIPRGYPSNKVAVAYNNKVXXXXXXXXXXXXX 127
             SLISALNVE+ LRGLPITDADHYGRLGIPRG P + V  AYN KV             
Sbjct: 68  TSSLISALNVEKILRGLPITDADHYGRLGIPRGCPFDLVGGAYNIKVQELKSQNLEEDEL 127

Query: 128 XXXXXXXXXXYTIMSSVEERRLYDWSLARTENTGRYNWPYEADIXXXXXXXXX--XXXXX 185
                     YTI+SS EERR+YDWSLAR ENT ++ WP+E DI                
Sbjct: 128 EKKLELLKESYTILSSEEERRIYDWSLARAENTDKFVWPFEVDITQSKISKEDPPQLDPE 187

Query: 186 DVGPTRVVGFVFLGWIVISVVLSISLNL 213
           DVGPTRVVG+  LGWI++S+VLSI+LNL
Sbjct: 188 DVGPTRVVGYFLLGWIMLSIVLSIALNL 215