Miyakogusa Predicted Gene
- Lj1g3v1788020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1788020.1 tr|G7J8D4|G7J8D4_MEDTR Omega-amidase NIT2
OS=Medicago truncatula GN=MTR_3g104850 PE=4 SV=1,73.03,0,seg,NULL;
UPF0012,Uncharacterised protein family UPF0012, conserved site;
Carbon-nitrogen hydrolase,,CUFF.27928.1
(317 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g05770.1 339 2e-93
Glyma20g02020.1 271 5e-73
Glyma10g43950.2 105 7e-23
Glyma10g43950.1 105 8e-23
Glyma20g38690.1 73 5e-13
Glyma07g30090.1 58 2e-08
Glyma08g07960.1 55 1e-07
Glyma12g31100.2 55 1e-07
Glyma12g31100.1 55 1e-07
Glyma13g39210.1 54 3e-07
Glyma11g18620.1 51 2e-06
Glyma12g09750.1 51 2e-06
>Glyma06g05770.1
Length = 352
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/301 (62%), Positives = 199/301 (66%), Gaps = 30/301 (9%)
Query: 1 MKPSALSSLQLTFKSFNLHHRTLTRTSNLP-FLSTTNRRIHXXXXXXXXIMSA-AATSEX 58
MK SAL L KSF L + T S P FL ++ R IMSA + SE
Sbjct: 1 MKASAL----LNLKSFTLSRHSPTSNSFFPPFLCPSHPRHRRIHHSRNPIMSATSVNSER 56
Query: 59 XXXXXXXXXXXXXLTKFKIALCQLSVSADKDXXXXXXXXXXXXXXXXXXKXXXXXXXXXX 118
L+ FKI LCQLSVS DKD +
Sbjct: 57 ARAPPAIPLPPPPLSNFKIGLCQLSVSPDKDSNIAHARTAIQDAASKGAQLVLL------ 110
Query: 119 XXXXXXXXXXXXXXXXQEIWNSPYSNDSFPIYAEDIDAGLNASPSTAMLSELSRLLKVTI 178
EIWNSPYSNDSFP+YAEDIDAG ASPSTAMLSELSRLLK+TI
Sbjct: 111 ----------------PEIWNSPYSNDSFPVYAEDIDAG--ASPSTAMLSELSRLLKITI 152
Query: 179 VGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGKITFIESKTLSAGETPTI 238
VGGSIPERSG LYNTCCVFGTDGNL AKHRKIHLFDIDIPGKITFIESKTL+AGETPTI
Sbjct: 153 VGGSIPERSGGLLYNTCCVFGTDGNLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTI 212
Query: 239 VDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGAFNMTTGPLHWELLQRARAMDNQ 298
VDTEVGRIGIGICYDIRFPELAMIYAARGAHLL YPGAFNMTTGPLHWELLQRARA DNQ
Sbjct: 213 VDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQ 272
Query: 299 V 299
+
Sbjct: 273 L 273
>Glyma20g02020.1
Length = 222
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/226 (65%), Positives = 153/226 (67%), Gaps = 28/226 (12%)
Query: 73 TKFKIALCQLSVSADKDXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXX 132
+ FKI L QLSVS DKD +
Sbjct: 25 SNFKIGLYQLSVSPDKDNNIAHARTAIQDDASKGAQLVLL-------------------- 64
Query: 133 XXQEIWNSPYSNDSFPIYAEDIDAGLNASPSTAMLSELSRLLKVTIVGGSIPERSGDRLY 192
EIWNSPYSNDSF +YAEDIDAG ASPSTAMLSELSR+LK+TIVG I E G LY
Sbjct: 65 --PEIWNSPYSNDSFSVYAEDIDAG--ASPSTAMLSELSRILKITIVGCFILESYGGLLY 120
Query: 193 NTCCVFGTDGNLKAKHRKIHLFDIDIPGKITFIESKTLSAGETPTIVDTEVGRIGIGICY 252
NTCCVFGTD NL AK RKIHLFDIDIPGKITFIESKTL+ GET TIVDTEVGRI IGICY
Sbjct: 121 NTCCVFGTDENLLAKDRKIHLFDIDIPGKITFIESKTLTVGETLTIVDTEVGRISIGICY 180
Query: 253 DIRFPELAMIYAARGAHLLLYPGAFNMTTGPLHWELLQRARAMDNQ 298
DIRFPELAMIY ARGAHLL YPGAFNMTT PLHWELL A DNQ
Sbjct: 181 DIRFPELAMIYVARGAHLLCYPGAFNMTTRPLHWELL----ATDNQ 222
>Glyma10g43950.2
Length = 311
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGD--RLYNTCCVFGTDGNLKAKHRKIHLFDIDIP 219
P + L+R + + G E+ D RL NT + G + + + KIHLFD+D+P
Sbjct: 95 PIMSHYCSLARESSIWLSLGGFQEKGSDPQRLSNTHVIVDDTGKIISSYSKIHLFDVDVP 154
Query: 220 GKITFIESKTLSAGETPTIVDTEVGRIGIGICYDIRFPEL-AMIYAARGAHLLLYPGAFN 278
G + ES +G+ VD+ VGR+G+ +CYD+RFPE+ ++ A +LL P AF
Sbjct: 155 GGRVYKESSFTESGKDIVAVDSPVGRLGLSVCYDLRFPEMYQLLRFQHEAQVLLVPAAFT 214
Query: 279 MTTGPLHWELLQRARAMDNQ 298
TG HWE+L RARA++ Q
Sbjct: 215 TVTGEAHWEILLRARAIETQ 234
>Glyma10g43950.1
Length = 320
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGD--RLYNTCCVFGTDGNLKAKHRKIHLFDIDIP 219
P + L+R + + G E+ D RL NT + G + + + KIHLFD+D+P
Sbjct: 104 PIMSHYCSLARESSIWLSLGGFQEKGSDPQRLSNTHVIVDDTGKIISSYSKIHLFDVDVP 163
Query: 220 GKITFIESKTLSAGETPTIVDTEVGRIGIGICYDIRFPEL-AMIYAARGAHLLLYPGAFN 278
G + ES +G+ VD+ VGR+G+ +CYD+RFPE+ ++ A +LL P AF
Sbjct: 164 GGRVYKESSFTESGKDIVAVDSPVGRLGLSVCYDLRFPEMYQLLRFQHEAQVLLVPAAFT 223
Query: 279 MTTGPLHWELLQRARAMDNQ 298
TG HWE+L RARA++ Q
Sbjct: 224 TVTGEAHWEILLRARAIETQ 243
>Glyma20g38690.1
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
Query: 214 FDIDIPGKITFIES---------------KTLSAGETP---TIVDTEVGRIGIGICYDIR 255
FD+D+PG + ES K+ GE VD+ +GR+G+ +CYD+R
Sbjct: 87 FDVDVPGGRVYKESSFTESVLPQRNSLSRKSEGKGEGELDIVAVDSPIGRLGLSVCYDLR 146
Query: 256 FPEL-AMIYAARGAHLLLYPGAFNMTTGPLHWELLQRARAMDNQ 298
FPE+ ++ A +LL P AF TG HWE+L RAR ++ Q
Sbjct: 147 FPEMYQLLRFQHEAQVLLVPAAFTTVTGEAHWEILLRARVIETQ 190
>Glyma07g30090.1
Length = 408
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 135 QEIWNSPYS----NDSFPIYAEDIDAGLNASPSTAMLSELSRLLKVTIVGGSIPERS--- 187
QE W P++ + +AE +D ST L + + IV I ER
Sbjct: 136 QEAWMMPFAFCTREKRWCEFAEPVDG-----ESTKFLQSFALKYNMVIVS-PILERDINH 189
Query: 188 GDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGKITFIESKTLSAGETP-TIVDTEVGRI 246
G+ ++NT V G GN+ KHRK H IP F ES G T + +T G+I
Sbjct: 190 GEVIWNTAVVIGNHGNIIGKHRKNH-----IPRVGDFNESTYYMEGNTGHPVFETAFGKI 244
Query: 247 GIGICYDIRFPELAMIYAARGAHLLLYPGAFNMTTGPLH---WELLQRARAMDN 297
I ICY P + + GA ++ P A T G L W + R A+ N
Sbjct: 245 AINICYGRHHPLNWLAFGLNGAEIVFNPSA---TVGELSEPMWPIEARNAAIAN 295
>Glyma08g07960.1
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGK 221
P+ + +L++ L V ++ S E + + YN+ + DG +RK H IP
Sbjct: 72 PTILRMQKLAKELGV-VIPVSFFEEANNAHYNSIAIIDADGTDLGIYRKSH-----IPDG 125
Query: 222 ITFIESKTLSAGETP-TIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGAFNM- 279
+ E + G+T + T++ +IG+ IC+D FPE A +GA +L YP A
Sbjct: 126 PGYEEKFYFNPGDTGFKVFQTKLAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSE 185
Query: 280 -TTGPL----HWELLQRARAMDNQV 299
G + HW+ + + A N V
Sbjct: 186 PQDGSIDSRDHWKRVMQGHAGANLV 210
>Glyma12g31100.2
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGK 221
P+ + +L++ L V ++ S E + + YN+ + +DG +RK H IP
Sbjct: 72 PTILRMQKLAKELGV-VIPVSFFEEANNAHYNSIAIIDSDGTDLGIYRKSH-----IPDG 125
Query: 222 ITFIESKTLSAGETP-TIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGAFNMT 280
+ E + G+T + T+ +IG+ IC+D FPE A +GA +L YP A
Sbjct: 126 PGYEEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSE 185
Query: 281 --TGPL----HWELLQRARAMDNQV 299
G + HW+ + + A N V
Sbjct: 186 PHDGSIDSRDHWKRVMQGHAGANLV 210
>Glyma12g31100.1
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGK 221
P+ + +L++ L V ++ S E + + YN+ + +DG +RK H IP
Sbjct: 72 PTILRMQKLAKELGV-VIPVSFFEEANNAHYNSIAIIDSDGTDLGIYRKSH-----IPDG 125
Query: 222 ITFIESKTLSAGETP-TIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGAFNMT 280
+ E + G+T + T+ +IG+ IC+D FPE A +GA +L YP A
Sbjct: 126 PGYEEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSE 185
Query: 281 --TGPL----HWELLQRARAMDNQV 299
G + HW+ + + A N V
Sbjct: 186 PHDGSIDSRDHWKRVMQGHAGANLV 210
>Glyma13g39210.1
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 162 PSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPGK 221
P+ + +L++ L V ++ S E + + YN+ + DG +RK H IP
Sbjct: 72 PTILRMQKLAKELGV-VIPVSFFEEANNAHYNSTAIIDADGTDLGIYRKSH-----IPDG 125
Query: 222 ITFIESKTLSAGETP-TIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGAFNMT 280
+ E + G+T + T+ ++G+ IC+D FPE A +GA +L YP A
Sbjct: 126 PGYEEKFYFNPGDTGFKVFQTKFAKVGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSE 185
Query: 281 --TGPL----HWELLQRARAMDNQV 299
G + HW+ + + A N V
Sbjct: 186 PHDGSIDSRDHWKRVMQGHAGANLV 210
>Glyma11g18620.1
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 161 SPSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPG 220
P L+ ++ KV +V G I ER G LY T F + G+ KHRKI +P
Sbjct: 109 GPEVDRLAAMAGKYKVHLVMGVI-ERDGYTLYCTVLFFDSQGHYLGKHRKI------MP- 160
Query: 221 KITFIESKTLSAGETPTI--VDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGA 276
T +E G+ TI +T VG+IG IC++ R P L A+G + P A
Sbjct: 161 --TALERVIWGFGDGSTIPVFETPVGKIGAAICWENRMPLLRTAMYAKGVEIYCAPTA 216
>Glyma12g09750.1
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 161 SPSTAMLSELSRLLKVTIVGGSIPERSGDRLYNTCCVFGTDGNLKAKHRKIHLFDIDIPG 220
P L+ ++ KV +V G I ER G LY T F + G+ KHRKI +P
Sbjct: 109 GPEVDRLAAMAGKYKVHLVMGVI-ERDGYTLYCTVLFFDSQGHYLGKHRKI------MP- 160
Query: 221 KITFIESKTLSAGETPTI--VDTEVGRIGIGICYDIRFPELAMIYAARGAHLLLYPGA 276
T +E G+ TI +T VG+IG IC++ R P L A+G + P A
Sbjct: 161 --TALERVIWGFGDGSTIPVFETPVGKIGAAICWENRMPLLRTAMYAKGVEIYCAPTA 216