Miyakogusa Predicted Gene

Lj1g3v1785760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785760.1 tr|A9TUC6|A9TUC6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_150936,39.34,5e-19,
,NODE_84813_length_665_cov_15.273685.path1.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g41880.2                                                       230   2e-61
Glyma19g41880.1                                                       230   2e-61
Glyma03g39310.1                                                       206   4e-54

>Glyma19g41880.2 
          Length = 126

 Score =  230 bits (587), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 1   MAFFEVKSGALVSLQDLHPSSPFFKQGASIRIIGKLREYSIETGLAIVVDGDSILKVSTE 60
           MA  E+KSGALVSLQDL PSSPFFKQGAS+RI GKL EYSIETGLA ++DGD ILKVST+
Sbjct: 1   MASLEIKSGALVSLQDLRPSSPFFKQGASLRITGKLHEYSIETGLATIIDGDDILKVSTK 60

Query: 61  HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLKQFQANHL 120
           HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLL+QFQ NHL
Sbjct: 61  HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQTNHL 120

Query: 121 NNPAT 125
           NNPAT
Sbjct: 121 NNPAT 125


>Glyma19g41880.1 
          Length = 126

 Score =  230 bits (587), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/125 (88%), Positives = 117/125 (93%)

Query: 1   MAFFEVKSGALVSLQDLHPSSPFFKQGASIRIIGKLREYSIETGLAIVVDGDSILKVSTE 60
           MA  E+KSGALVSLQDL PSSPFFKQGAS+RI GKL EYSIETGLA ++DGD ILKVST+
Sbjct: 1   MASLEIKSGALVSLQDLRPSSPFFKQGASLRITGKLHEYSIETGLATIIDGDDILKVSTK 60

Query: 61  HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLKQFQANHL 120
           HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLL+QFQ NHL
Sbjct: 61  HLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQTNHL 120

Query: 121 NNPAT 125
           NNPAT
Sbjct: 121 NNPAT 125


>Glyma03g39310.1 
          Length = 142

 Score =  206 bits (524), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/141 (74%), Positives = 112/141 (79%), Gaps = 16/141 (11%)

Query: 1   MAFFEVKSGALVSLQDLHPSSPFFKQGASIRIIGKLREYSIETGLAIVVDGDSILKVSTE 60
           MA  E+KSGALVSLQDL PSSPFF+QGAS+RI GKL EYSIETGLA ++DGD ILKVST+
Sbjct: 1   MASLEIKSGALVSLQDLRPSSPFFEQGASLRITGKLHEYSIETGLATIIDGDDILKVSTK 60

Query: 61  HLRDLTFQVGSVYQFIGELLIQP----------------DNEGVLQARVGRNVDGIDLNL 104
           HLRDLTFQVGSVYQFI ELLIQ                    GVLQARVGRNVDGIDLNL
Sbjct: 61  HLRDLTFQVGSVYQFISELLIQAVMRHIKCFVITHSPTTCTMGVLQARVGRNVDGIDLNL 120

Query: 105 YHQSLLLLKQFQANHLNNPAT 125
           YHQSLL L+QFQANHLNNPAT
Sbjct: 121 YHQSLLFLRQFQANHLNNPAT 141