Miyakogusa Predicted Gene
- Lj1g3v1785740.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1785740.2 Non Chatacterized Hit- tr|B6U701|B6U701_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,55.95,2e-18,DUF1639,Protein of unknown function DUF1639;
seg,NULL,CUFF.27915.2
(297 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g05260.1 311 7e-85
Glyma17g34910.1 221 6e-58
Glyma06g05340.2 218 9e-57
Glyma06g05340.1 218 9e-57
Glyma17g34910.2 147 2e-35
Glyma16g04500.1 132 4e-31
Glyma19g28930.2 132 5e-31
Glyma19g28930.1 123 3e-28
Glyma14g10610.1 119 3e-27
Glyma16g14740.1 107 1e-23
Glyma14g10600.1 85 8e-17
Glyma19g28930.3 67 3e-11
Glyma08g32770.1 52 5e-07
Glyma07g10390.1 49 5e-06
>Glyma04g05260.1
Length = 280
Score = 311 bits (796), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 187/293 (63%), Positives = 198/293 (67%), Gaps = 30/293 (10%)
Query: 6 SGVREKPAAGGDGGSLLLRASSDGMRQSGTTSDLVLQWGNRKRLRCMKVQVKDKDDSTGP 65
S VREK GGDG SLLLRASSD RQ+ TTS+LVLQWGNRKRLRCMKVQVKD DS+GP
Sbjct: 17 SSVREK--NGGDG-SLLLRASSDSARQA-TTSNLVLQWGNRKRLRCMKVQVKD--DSSGP 70
Query: 66 XXXXXXXXXXXXXXXXNNKEPLNKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLR 125
K+ LNK PNLR
Sbjct: 71 VQRTTVRVDRRVVRTD--KDSLNK---------------ATFGVNYNNHHHQSNGYPNLR 113
Query: 126 QRPSSPPHRILRNSETSSAMRXXXXXXQSNGVVRGIASPDRGGAHDKRGTXXXXXXXXXX 185
+RPSSP RILRNSE+SSAMR QSNG VRGIASPDRG AHDKRG
Sbjct: 114 ERPSSPQPRILRNSESSSAMRGG----QSNGGVRGIASPDRG-AHDKRGAHNNLLNDNN- 167
Query: 186 KPAASSDTAHDXXXXXXXXXXXDAA-PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPK 244
K AASSDTAHD DAA PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPK
Sbjct: 168 KSAASSDTAHDSKKGGSPSGSGDAAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPK 227
Query: 245 KRAKFVQRTLNLVSPGAWLCDLTLERYEVREKKVTKKRPRGLKAMGNMESESE 297
KRAKF+QRTLNLVSPGAWLCDLTLERYEVREKK++KKRPRGLKAMGNM+S+SE
Sbjct: 228 KRAKFIQRTLNLVSPGAWLCDLTLERYEVREKKISKKRPRGLKAMGNMDSDSE 280
>Glyma17g34910.1
Length = 313
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 135 ILRNSETSSAMRXXXXXXQSNGVVRGIASPDRGGAHDKRGTXXXXXXXXXX-KPAASSDT 193
ILRNSETSSAMR QSNG VRGIASPDRG AHDK+GT K SSDT
Sbjct: 149 ILRNSETSSAMRGG----QSNGSVRGIASPDRG-AHDKKGTHNNHLNDNNNNKSVVSSDT 203
Query: 194 AHDXXXXXXXXXXX-DAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQR 252
AH+ D APPVWPPKFVIALTNKEKEEDFL +KGSKLPQRPKKRAKF+QR
Sbjct: 204 AHESKKGGGSPSGSGDVAPPVWPPKFVIALTNKEKEEDFLLLKGSKLPQRPKKRAKFIQR 263
Query: 253 TLNLVSPGAWLCDLTLERYEVREKKVT-----KKRPRGLKAMGNMESESE 297
TLNLVSPG WLCDLTLERYEVREKK++ KKRPRGLKAMGNM+SESE
Sbjct: 264 TLNLVSPGTWLCDLTLERYEVREKKISKKVGEKKRPRGLKAMGNMDSESE 313
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 11/73 (15%)
Query: 1 MDKEA----SGVREKPAAGGDG------GSLLLRASSDGMRQSGTTSDLVLQWGNRKRLR 50
MDKE+ + VRE+ GG G GSLLLR SDGMRQ+ TTSDL LQWGNRKRLR
Sbjct: 1 MDKESHNNGNSVRERDKVGGGGDNSSGAGSLLLRGGSDGMRQA-TTSDLGLQWGNRKRLR 59
Query: 51 CMKVQVKDKDDST 63
CMKVQVK S+
Sbjct: 60 CMKVQVKHDSSSS 72
>Glyma06g05340.2
Length = 146
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 121/148 (81%), Gaps = 9/148 (6%)
Query: 153 QSNG--VVRGIASPDRGGAHDKRGTXXXXXXXXXXKPAASSDTAHDXXXXXXXXXXXDAA 210
QSNG VRGIASPDRG AHDKRGT K AASSDTAHD DAA
Sbjct: 5 QSNGGVSVRGIASPDRG-AHDKRGTHNDNN-----KSAASSDTAHDSKKGGSPSGSGDAA 58
Query: 211 -PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLE 269
PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKF+QRTLNLVSPGAWLCDLTLE
Sbjct: 59 APPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLE 118
Query: 270 RYEVREKKVTKKRPRGLKAMGNMESESE 297
RYEVREKK++KKRPRGLKAMGNM+S+SE
Sbjct: 119 RYEVREKKISKKRPRGLKAMGNMDSDSE 146
>Glyma06g05340.1
Length = 146
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 121/148 (81%), Gaps = 9/148 (6%)
Query: 153 QSNG--VVRGIASPDRGGAHDKRGTXXXXXXXXXXKPAASSDTAHDXXXXXXXXXXXDAA 210
QSNG VRGIASPDRG AHDKRGT K AASSDTAHD DAA
Sbjct: 5 QSNGGVSVRGIASPDRG-AHDKRGTHNDNN-----KSAASSDTAHDSKKGGSPSGSGDAA 58
Query: 211 -PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLE 269
PPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKF+QRTLNLVSPGAWLCDLTLE
Sbjct: 59 APPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLE 118
Query: 270 RYEVREKKVTKKRPRGLKAMGNMESESE 297
RYEVREKK++KKRPRGLKAMGNM+S+SE
Sbjct: 119 RYEVREKKISKKRPRGLKAMGNMDSDSE 146
>Glyma17g34910.2
Length = 270
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 88/124 (70%), Gaps = 7/124 (5%)
Query: 135 ILRNSETSSAMRXXXXXXQSNGVVRGIASPDRGGAHDKRGTXXXXXXXXXX-KPAASSDT 193
ILRNSETSSAMR QSNG VRGIASPDRG AHDK+GT K SSDT
Sbjct: 149 ILRNSETSSAMRGG----QSNGSVRGIASPDRG-AHDKKGTHNNHLNDNNNNKSVVSSDT 203
Query: 194 AHDXXXXXXXXXXX-DAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQR 252
AH+ D APPVWPPKFVIALTNKEKEEDFL +KGSKLPQRPKKRAKF+QR
Sbjct: 204 AHESKKGGGSPSGSGDVAPPVWPPKFVIALTNKEKEEDFLLLKGSKLPQRPKKRAKFIQR 263
Query: 253 TLNL 256
TLN+
Sbjct: 264 TLNV 267
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 11/73 (15%)
Query: 1 MDKEA----SGVREKPAAGGDG------GSLLLRASSDGMRQSGTTSDLVLQWGNRKRLR 50
MDKE+ + VRE+ GG G GSLLLR SDGMRQ+ TTSDL LQWGNRKRLR
Sbjct: 1 MDKESHNNGNSVRERDKVGGGGDNSSGAGSLLLRGGSDGMRQA-TTSDLGLQWGNRKRLR 59
Query: 51 CMKVQVKDKDDST 63
CMKVQVK S+
Sbjct: 60 CMKVQVKHDSSSS 72
>Glyma16g04500.1
Length = 218
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
VWP K I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVSPGAWL D+ ERYE
Sbjct: 135 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYE 193
Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
VREKK KKRPRGLKAMG+MES+SE
Sbjct: 194 VREKKSNKKRPRGLKAMGSMESDSE 218
>Glyma19g28930.2
Length = 218
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
VWP K I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVSPGAWL D+ ERYE
Sbjct: 135 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLSDMCQERYE 193
Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
VREKK KKRPRGLKAMG+MES+SE
Sbjct: 194 VREKKSNKKRPRGLKAMGSMESDSE 218
>Glyma19g28930.1
Length = 231
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 73/98 (74%), Gaps = 14/98 (14%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
VWP K I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVSPGAWL D+ ERYE
Sbjct: 135 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLSDMCQERYE 193
Query: 273 VREKKVTKK-------------RPRGLKAMGNMESESE 297
VREKK KK RPRGLKAMG+MES+SE
Sbjct: 194 VREKKSNKKLCTTRLIYSLGLQRPRGLKAMGSMESDSE 231
>Glyma14g10610.1
Length = 148
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 168 GAHDKRGTXXXXXXXXXXKPAASSDTAHDXXXXXXXXXXX--DAAPPVWPPKFVIALTNK 225
GAHDKRGT K SSDTAHD DAAPPVWPPKFVIALTNK
Sbjct: 46 GAHDKRGTQNNHLNDNNNKSVVSSDTAHDSKKGGGGSPSGSGDAAPPVWPPKFVIALTNK 105
Query: 226 EKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLV 257
EKEEDFL +KGSKLPQRPKKRAKF+QRTLN+V
Sbjct: 106 EKEEDFLLLKGSKLPQRPKKRAKFIQRTLNIV 137
>Glyma16g14740.1
Length = 258
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
PK IAL+ KEKE+DFLA+KG+K+PQRPKKRAK V R L PG WL +LT RYEVRE
Sbjct: 175 PKIYIALSRKEKEDDFLAMKGTKIPQRPKKRAKNVDRILQCCFPGMWLSELTKSRYEVRE 234
Query: 276 KKVTK--KRPRGLKAMGNMESESE 297
KK K KR RGLK M N++S+SE
Sbjct: 235 KKSVKKQKRSRGLKGMENLDSDSE 258
>Glyma14g10600.1
Length = 53
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 247 AKFVQRTLNLVSPGAWLCDLTLERYEVREKKVTKKRPRGLKAMGNMESESE 297
F L LVSPG WLCDLTLERYEVREKK++KKRPRGLKAMGNM+S+SE
Sbjct: 3 CSFWIVLLQLVSPGTWLCDLTLERYEVREKKISKKRPRGLKAMGNMDSDSE 53
>Glyma19g28930.3
Length = 183
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVS 258
VWP K I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVS
Sbjct: 135 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSL-LVS 178
>Glyma08g32770.1
Length = 127
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLT 267
P+ I+L+ KEKE+DFLA+KG+K+ QRPK V R L P WL +LT
Sbjct: 65 PRIYISLSRKEKEDDFLAMKGTKILQRPKN----VDRILQCCFPRMWLSELT 112
>Glyma07g10390.1
Length = 198
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
KF ++L+ +E E+DF A+ G++ P+RPKKR + VQR LN + PG WL ++T E Y+V
Sbjct: 137 KFSVSLSKEEVEQDFWALLGARPPRRPKKRPRIVQRQLNTLFPGLWLAEITAESYKV 193