Miyakogusa Predicted Gene

Lj1g3v1785420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785420.1 Non Chatacterized Hit- tr|J3MA83|J3MA83_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G3,85.71,0.0000000000005,seg,NULL,CUFF.27810.1
         (81 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16830.1                                                       104   2e-23
Glyma09g05510.1                                                       103   3e-23

>Glyma15g16830.1 
          Length = 483

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 54/73 (73%)

Query: 1   MRAYGIDFKEGPDGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMXXXXXXXXXX 60
           MRAYG+ FKEGPDGFGVYASKDVEPLRR RVIMEIPLELMLTISKKLPWM          
Sbjct: 87  MRAYGVQFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPLDH 146

Query: 61  XXXXXXNSTNPEV 73
                 NSTNPE 
Sbjct: 147 PIFDIINSTNPET 159


>Glyma09g05510.1 
          Length = 482

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 54/73 (73%)

Query: 1   MRAYGIDFKEGPDGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMXXXXXXXXXX 60
           MRAYG+ FKEGPDGFGVYASKDVEPLRR RV+MEIPLELMLTISKKLPWM          
Sbjct: 86  MRAYGVHFKEGPDGFGVYASKDVEPLRRARVVMEIPLELMLTISKKLPWMFFPDIIPLDH 145

Query: 61  XXXXXXNSTNPEV 73
                 NSTNPE 
Sbjct: 146 PIFDIINSTNPET 158