Miyakogusa Predicted Gene

Lj1g3v1755650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1755650.1 tr|A8HQX6|A8HQX6_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146614 PE=4
SV=1,31.92,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.27762.1
         (348 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g05070.1                                                       447   e-125
Glyma04g05000.1                                                       445   e-125
Glyma11g04940.1                                                       241   1e-63
Glyma01g40350.1                                                       233   2e-61

>Glyma06g05070.1 
          Length = 410

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/359 (64%), Positives = 274/359 (76%), Gaps = 21/359 (5%)

Query: 1   MVSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVL 60
           ++SNSADTV+++S+DLN FL S+SDEIPNSLKQL+KIA S EF  +L+RVSE+VTLGI+L
Sbjct: 62  LISNSADTVTVISNDLNRFLASESDEIPNSLKQLAKIAKSNEFSMSLARVSEAVTLGILL 121

Query: 61  GCKSQFNS-------SGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADS 113
           G KSQ  +       + E S FSD+V E+  SKAGT          ARN VL F+ DA+ 
Sbjct: 122 GYKSQPGNDKKDTKITAEASGFSDRVLERFFSKAGTGFVSVVVGSFARNLVLGFY-DAEP 180

Query: 114 VGVRSNSDDVPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSN 173
           VG R  SD VP WV VICDERCGKLIGDCV+TFVSTAVAVFLDKTMDVNTYD++FAGLSN
Sbjct: 181 VGARFQSD-VPGWVNVICDERCGKLIGDCVQTFVSTAVAVFLDKTMDVNTYDEMFAGLSN 239

Query: 174 PKHHDKVKGILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDG 233
           PKH + VKGILVS+CNGA+E+FVRTSHQVLTN              +        + EDG
Sbjct: 240 PKHQENVKGILVSMCNGAMETFVRTSHQVLTN------GTARPNTGLSVAPVVVPVSEDG 293

Query: 234 CLKPEALLQQLRV----SGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEF 289
           CLKPE    QL++    +GV D GW+EQI+S LSVPANRRFV+DVTGRVT ETVRSFV F
Sbjct: 294 CLKPEVF--QLKIGSLINGVQDVGWLEQIKSVLSVPANRRFVLDVTGRVTFETVRSFVAF 351

Query: 290 LLWRMSDGLKSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSRIIMPA 348
           L+WR+SDG K ++SKV EEV+ +G EVVRYVGAKSSVILTLCLALYLHI+GGSRI++PA
Sbjct: 352 LVWRISDGFKRSVSKVHEEVMGKGLEVVRYVGAKSSVILTLCLALYLHIMGGSRILLPA 410


>Glyma04g05000.1 
          Length = 415

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/365 (63%), Positives = 276/365 (75%), Gaps = 25/365 (6%)

Query: 1   MVSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVL 60
           ++SNSAD V+++S+DLN FL S+SDEIPNSLKQL+KIA S +F  +L+R+SE+VTLGI L
Sbjct: 59  LISNSADIVAVISNDLNRFLASESDEIPNSLKQLAKIAKSNDFSTSLARLSEAVTLGIFL 118

Query: 61  GCKSQ----FNS---------SGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAF 107
           G KS     +N          + E S FSD+V E+L SKAGT          ARN VL F
Sbjct: 119 GYKSHAGNDYNGNKDNIPSEITAEASRFSDRVLERLFSKAGTGFVSVVVGSFARNLVLGF 178

Query: 108 FSDADSVGVRSNSDDVPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDL 167
           + DA+SVG RS SD VP WV VICDERCGKLIGDCV+TFVSTAVAVFLDKT DVNTYD++
Sbjct: 179 Y-DAESVGTRSQSD-VPGWVNVICDERCGKLIGDCVQTFVSTAVAVFLDKTKDVNTYDEM 236

Query: 168 FAGLSNPKHHDKVKGILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGP 227
            AGLSNPKH + VKGILVS+CNGAVE+FVRTSHQVLTN              +       
Sbjct: 237 LAGLSNPKHQENVKGILVSMCNGAVETFVRTSHQVLTN------RSVRSNSGLSVSPVVV 290

Query: 228 GLIEDGCLKPEALLQQLR----VSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETV 283
            + E+GCLK EALLQQL+    V+GV D GW+EQI+S L VP N+RFV+DVTGRVT+ETV
Sbjct: 291 PVSEEGCLKQEALLQQLKIGSSVNGVQDVGWLEQIKSTLLVPVNQRFVLDVTGRVTIETV 350

Query: 284 RSFVEFLLWRMSDGLKSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSR 343
           RSFV FLLWR+SDG KS++SKV EEV+ +G EVVRYVGAKSSVILTLCLALYLHI+GGSR
Sbjct: 351 RSFVAFLLWRISDGFKSSVSKVHEEVLGKGLEVVRYVGAKSSVILTLCLALYLHIMGGSR 410

Query: 344 IIMPA 348
           I++PA
Sbjct: 411 ILLPA 415


>Glyma11g04940.1 
          Length = 267

 Score =  241 bits (615), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/287 (46%), Positives = 180/287 (62%), Gaps = 39/287 (13%)

Query: 72  GSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSD-------ADSVGVRSNSDDVP 124
           GSS  D+V +K+++ AG+          ARN VLAF+SD        +S  + SNS+ V 
Sbjct: 10  GSSVVDRVLDKMLTPAGSGFASVVLGSFARNLVLAFYSDQQHNHSGGESNSINSNSETVL 69

Query: 125 RWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSNPKHHDKVKGIL 184
            WV V+C +RCG+LIG+CV+ FVSTAVAV+LDKTM +NTYDD FAGL+NPKH   V+ +L
Sbjct: 70  AWVDVVCGDRCGELIGNCVQLFVSTAVAVYLDKTMHINTYDDFFAGLTNPKHETNVRDML 129

Query: 185 VSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDGCLKPEALLQQL 244
           VSVCNGAVE+ V+TSH V+T+                    G G+       P     Q 
Sbjct: 130 VSVCNGAVETLVKTSHHVITSSNADV---------------GSGM-------PSI---QS 164

Query: 245 RVSGVGD---SGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLLWRMSDGLKST 301
           +V    D   SGW+ ++ S+L+VP+NRR V+DVTGRVT ETVRSF+EF+L      ++  
Sbjct: 165 KVDVCDDENKSGWVSKVSSSLAVPSNRRLVLDVTGRVTFETVRSFMEFVLQTFCASVRRC 224

Query: 302 LSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSRIIMPA 348
              V E V+    E+VRYV AKSSV++T+CL+L LH++GG   ++PA
Sbjct: 225 AHIVHEAVL----EIVRYVAAKSSVVVTICLSLCLHMMGGGWALVPA 267


>Glyma01g40350.1 
          Length = 285

 Score =  233 bits (595), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/284 (45%), Positives = 179/284 (63%), Gaps = 15/284 (5%)

Query: 72  GSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSVGVR------SNSDDVPR 125
           GS+  D+V +K+++ AG+          ARN VLAF+SD  +   R      SNS+ V  
Sbjct: 10  GSTVVDRVLDKILTSAGSGFASVVLGSFARNLVLAFYSDQHNHSGREFNSSNSNSETVLA 69

Query: 126 WVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSNPKHHDKVKGILV 185
           WV V+C +RCG+LIG+CV+ FVSTAVAV+LDKTM +NTYDD FAGL+NPKH   V+ +L+
Sbjct: 70  WVDVVCGDRCGELIGNCVQLFVSTAVAVYLDKTMHINTYDDFFAGLTNPKHETNVRDMLL 129

Query: 186 SVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDGCLKPEALLQQLR 245
           SVCNGAVE+ V+TSHQV+T+              +   +      ED  +   ++  ++ 
Sbjct: 130 SVCNGAVETLVKTSHQVITSSNADVGSGSDSYLSIGETVRN----EDLGVGMSSVESKVD 185

Query: 246 V-SGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLLWRMSDGLKSTLSK 304
           V      SGW+ ++ S L+VP+NR  V+DVTGRVT ETVRSF+EF+L      ++     
Sbjct: 186 VCDDENKSGWLSKVSSTLAVPSNRSLVLDVTGRVTFETVRSFMEFVLQIFCASVRRCAHI 245

Query: 305 VREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSRIIMPA 348
           V E V+    E+VRYV AKSSVI+T+CL+L LHI+GG   ++ A
Sbjct: 246 VHEAVL----EIVRYVAAKSSVIVTICLSLCLHIMGGGWALVTA 285