Miyakogusa Predicted Gene

Lj1g3v1743570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1743570.1 tr|B9IBL5|B9IBL5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571985 PE=4
SV=1,36.14,2e-18,seg,NULL,CUFF.27748.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09970.1                                                       164   6e-41
Glyma17g35190.1                                                       157   7e-39
Glyma04g04940.1                                                       155   2e-38
Glyma06g05030.1                                                       154   3e-38
Glyma05g22740.1                                                        66   2e-11
Glyma17g17240.1                                                        49   2e-06

>Glyma14g09970.1 
          Length = 171

 Score =  164 bits (414), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 110/171 (64%), Gaps = 21/171 (12%)

Query: 2   MRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSY---GNPMDPAGRFSSLSR 58
           MR K QSQ+  ++IMASP RALG+ARD YVRSIT CGQ VSY   G+P + AGRF   SR
Sbjct: 1   MRCKKQSQNKLVRIMASPIRALGKARDMYVRSITNCGQHVSYYGGGDPTEGAGRF---SR 57

Query: 59  SQSVATSRSGD----GDDYAELLRAASARTMVGRIDMDLILKXXXXXXXXXHRYHTEXXX 114
           S SVATS +       +DYAELLRAASART+  RIDMDL+LK          + H     
Sbjct: 58  SHSVATSTTTRYEVVSEDYAELLRAASARTLANRIDMDLVLK---------QQQHANSLK 108

Query: 115 XXXXXXXXXVGMGRIDEETPYDTSEGGVAFVAPDSYPRSKSYAVGKRNVAF 165
                    VGM RIDE+ PYD SEGGVAFV  D YPRS+SYAV KR  AF
Sbjct: 109 GNNLPKSSSVGMARIDEDKPYD-SEGGVAFVT-DPYPRSRSYAVAKRGPAF 157


>Glyma17g35190.1 
          Length = 165

 Score =  157 bits (396), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/162 (56%), Positives = 106/162 (65%), Gaps = 21/162 (12%)

Query: 1   MMRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSY--GNPMDPAGRFSSLSR 58
           MMRSK QSQ+ F++IMASP RALG+ARD YVRSIT CGQ VSY  G+P + AGRF   SR
Sbjct: 1   MMRSKKQSQNKFVRIMASPIRALGKARDMYVRSITNCGQHVSYYGGDPTEGAGRF---SR 57

Query: 59  SQSVATSRSGD--GDDYAELLRAASARTMVGRIDMDLILKXXXXXXXXXHRYHTEXXXXX 116
           S SVATS   +   +DYAELLRAASART+  RIDMDL+LK          + H       
Sbjct: 58  SHSVATSTRSEVVSEDYAELLRAASARTLANRIDMDLVLK---------QQQHANSSKGN 108

Query: 117 XXXXXXXVGMGRIDEETPYDTSEGGVAFVAPDSYPRSKSYAV 158
                  VGM RI+E+ PYD SE GV     DSYPRS+SYAV
Sbjct: 109 NLPKSSSVGMARIEEDKPYD-SEKGVT----DSYPRSRSYAV 145


>Glyma04g04940.1 
          Length = 155

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 101/159 (63%), Gaps = 10/159 (6%)

Query: 1   MMRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSYGNPMDPAGRFSSLSRSQ 60
           M +   + Q+  + I+ +P R LG+ARD YVRSIT CG  ++Y NP+D AGRF +L RS 
Sbjct: 1   MRKGNKKKQNKLVWIITTPLRMLGKARDIYVRSITNCGHKMNYSNPVDAAGRFQALPRSY 60

Query: 61  SVATSRSGDGDDYAELLRAASARTMVGRIDMDLILKXXXXXXXXXHRYHTEXXXXXXXXX 120
           S ATSRS + +D+AELLRAASART+  RID+DL+LK          +             
Sbjct: 61  SAATSRSDNNEDFAELLRAASARTLGNRIDVDLVLK---------QQAQARPVSSNGLPK 111

Query: 121 XXXVGMGRIDEETPYDTSEGGVAFVAPDSYPRSKSYAVG 159
              VGMGRIDE+TPYD  EG V  V P +YPRS+SYAVG
Sbjct: 112 STSVGMGRIDEDTPYDLGEGEVPVV-PKAYPRSRSYAVG 149


>Glyma06g05030.1 
          Length = 156

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 8/159 (5%)

Query: 2   MRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSYGNPMDPAGRFSSLSRSQS 61
           MR   + ++  + ++A+PFR LG+ARD YV SIT CG +++Y NP+D AGRF +L RS S
Sbjct: 1   MRKGNKKKNKLVWMIATPFRVLGKARDMYVSSITKCGHNMNYSNPVDAAGRFQALPRSYS 60

Query: 62  VATSRSGDGDDYAELLRAASARTMVGRIDMDLILKXXXXXXXXXHRYHTEXXXXXXXXXX 121
            ATSRS + +D+AELLRAASART+   ID+DL++K          +  T           
Sbjct: 61  AATSRSDNNEDFAELLRAASARTLGNIIDVDLVVKQQA-------QTQTRPVSSNGLPKS 113

Query: 122 XXVGMGRIDEETPYDTSEGGVAFVAPDSYPRSKSYAVGK 160
             VGMGRIDE+TPYD  EG V  V P +YPRS+SYAVGK
Sbjct: 114 TSVGMGRIDEDTPYDLGEGEVPVV-PKAYPRSRSYAVGK 151


>Glyma05g22740.1 
          Length = 144

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 20/147 (13%)

Query: 16  MASPFRALGRARDAYVRSITTCGQSVSY--GNPMDPAGRFSSLSRSQSV--ATSRSGDGD 71
           M +P R L +ARD YV+ +  C   +SY   +   P G+  +L RS SV  AT  +   D
Sbjct: 1   MKAPLRFLKKARDMYVKGMIECSGQLSYVEASIGCPTGQLCTLPRSFSVGSATRSTTSDD 60

Query: 72  DYAELLRAASARTMVGRIDMDLILKXXXXXXXXXHRYHTEXXXXXXXXXXXXVGM-GRID 130
           D+ EL+RAAS R+   R+                HR  +             VG+ GRID
Sbjct: 61  DFKELVRAASLRSYGNRVQFG-DAAAAAVKKMKMHRSRS-------------VGIFGRID 106

Query: 131 EETPYDTSEGGVAFVAPDSYPRSKSYA 157
           EE   +  + G+  V P++YPRSKSYA
Sbjct: 107 EEKVCEFGDDGIK-VRPNAYPRSKSYA 132


>Glyma17g17240.1 
          Length = 117

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 16 MASPFRALGRARDAYVRSITTCGQSVSY--GNPMDPAGRFSSLSRSQSV--ATSRSGDGD 71
          M +P R L +ARD YV  +  C   +SY   +   P G+  +L RS SV  AT  +   +
Sbjct: 1  MKAPLRFLKKARDMYVYGMIECSGQLSYVEASMGCPTGQLCTLPRSFSVGSATRSAASDE 60

Query: 72 DYAELLRAASARTMVGRI 89
          D+ EL+RAAS R+  GR+
Sbjct: 61 DFEELVRAASLRSYGGRV 78