Miyakogusa Predicted Gene

Lj1g3v1697890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697890.1 Non Chatacterized Hit- tr|I1MXK0|I1MXK0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26164
PE,48.31,0.000000000004, ,CUFF.27688.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g35600.1                                                        75   1e-14
Glyma04g04560.1                                                        72   1e-13
Glyma06g04650.1                                                        59   9e-10

>Glyma17g35600.1 
          Length = 90

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 12/89 (13%)

Query: 1  MKNTSLWIVLVAMMFLLSSQVCFVHSRVLRSKSSKETV-----------SSLGMTSFDVS 49
          MK +SL IV++  +F++SSQ CFV+ RVLR ++ K  V           SSLGM +F V+
Sbjct: 3  MKKSSLGIVMIITVFVVSSQFCFVYGRVLRPEALKTPVGDGCEDFKGEDSSLGMATFAVA 62

Query: 50 SKDSITRRASKLSLTHILASGPSKKGRGH 78
          S +S TR+ ++ SL + LASGPSKKG GH
Sbjct: 63 SNNSSTRQFAR-SLAYKLASGPSKKGPGH 90


>Glyma04g04560.1 
          Length = 90

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 11/85 (12%)

Query: 5  SLWIVLVAMMFLLSSQVCFVHSRVLRSK-----------SSKETVSSLGMTSFDVSSKDS 53
          SLWI LV +M +LSSQ+C VHSRVLRSK             KE+ SSL    F V S ++
Sbjct: 6  SLWIALVTIMLVLSSQLCLVHSRVLRSKVVLTEVADDCVELKESGSSLWRDQFFVVSSEN 65

Query: 54 ITRRASKLSLTHILASGPSKKGRGH 78
           + R SK SL   LASGPSKKG GH
Sbjct: 66 SSTRVSKRSLAFRLASGPSKKGPGH 90


>Glyma06g04650.1 
          Length = 89

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 13/90 (14%)

Query: 1  MKNTSLWIVLVAMMFLLSSQVCFVHSRVLRSKSS-----------KETVSSLGMT-SFDV 48
          M   SLWI    +M +LSSQ+C V SRVLRSK +           K + SSL  T SF V
Sbjct: 1  MPMKSLWIAFT-IMLVLSSQLCLVRSRVLRSKVALTKVASDCVKLKGSGSSLWTTKSFVV 59

Query: 49 SSKDSITRRASKLSLTHILASGPSKKGRGH 78
          S+ D+ +   SK SL   LASGPSKKG GH
Sbjct: 60 SNSDNSSTPVSKRSLAFRLASGPSKKGPGH 89