Miyakogusa Predicted Gene

Lj1g3v1686700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1686700.1 tr|Q2HTQ3|Q2HTQ3_MEDTR Cysteine proteinase
OS=Medicago truncatula GN=MTR_1g018840 PE=3
SV=1,65.71,0.0000000000002,seg,NULL,CUFF.27673.1
         (71 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g23650.1                                                        65   2e-11
Glyma17g35720.1                                                        57   6e-09
Glyma14g09440.1                                                        56   7e-09

>Glyma10g23650.1 
          Length = 422

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 1   MERNLKTNSAGKCGIAMMASYPIKKGQNXXXXXXXXXXXXXXXXHVCNSYYSCAPGTTCC 60
           +ERN++    GKCGIA+ ASYPIK G N                 VC+ YYSC  GTTCC
Sbjct: 289 LERNVQNTETGKCGIAIEASYPIKNGANPPNPGPSPPSPATPSI-VCDEYYSCNSGTTCC 347

Query: 61  CVYQFGKSCFG 71
           C++++   CFG
Sbjct: 348 CLFEYRGFCFG 358


>Glyma17g35720.1 
          Length = 476

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 1   MERNLKTNSAGKCGIAMMASYPIKKGQNXXXXXXXXXXXXXXXXHVCNSYYSCAPGTTCC 60
           +ERNL  + +GKCGIA+  SYP+K                    +VC++YYSCA   TCC
Sbjct: 341 LERNLANSRSGKCGIAIEPSYPLKN-GPNPPNPGPSPPSPVKPPNVCDNYYSCADSATCC 399

Query: 61  CVYQFGKSCF 70
           C+++FG +CF
Sbjct: 400 CIFEFGNACF 409


>Glyma14g09440.1 
          Length = 463

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 1   MERNLKTNSAGKCGIAMMASYPIKKGQNXXXXXXXXXXXXXXXXHVCNSYYSCAPGTTCC 60
           +ERNL  + +GKCGIA+  SYP+K                    +VC++YYSCA   TCC
Sbjct: 328 LERNLANSRSGKCGIAIEPSYPLKN-GPNPPNPGPSPPSPVKPPNVCDNYYSCADSATCC 386

Query: 61  CVYQFGKSCF 70
           C+++FG +CF
Sbjct: 387 CIFEFGNACF 396