Miyakogusa Predicted Gene

Lj1g3v1596960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1596960.1 tr|G7IR61|G7IR61_MEDTR Meiotic recombination
OS=Medicago truncatula GN=MTR_2g081100 PE=3 SV=1,87.32,0,seg,NULL;
DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A,DNA repair protein Mre11;
Mre11_DNA_bind,Mre11, ,NODE_38911_length_2268_cov_37.260582.path1.1
         (692 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g34750.1                                                       677   0.0  
Glyma14g12420.1                                                       224   3e-58
Glyma12g13940.1                                                       134   4e-31

>Glyma12g34750.1 
          Length = 597

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/705 (56%), Positives = 432/705 (61%), Gaps = 151/705 (21%)

Query: 1   MEKDEVRRHDSFQAFEEICSIAEEKQVDFMLLGGDLFHENKPTRSTLVKAIEILRRYCLN 60
           MEKDEVRRHDSF AFEEIC++AE  +VDF+LLGGDLFHENKP+RSTLVKAIEILRRYCLN
Sbjct: 23  MEKDEVRRHDSFHAFEEICAVAERHRVDFVLLGGDLFHENKPSRSTLVKAIEILRRYCLN 82

Query: 61  DRPVPFQVVSDQTLNFQNTFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSA 120
           DRPVPFQVVSDQTL         N+++   +              P+ +D     D L  
Sbjct: 83  DRPVPFQVVSDQTL---------NFQNASVS--------------PSLLD-----DTL-- 112

Query: 121 CNLVNYFGKTVLGGSGVGQITLHPILIKKGSTAVALYGLGNIRDERLNRMFQTPHAVQWM 180
                YF +                   +GST+VALYGLGNIRDERLNRMFQTPHAVQWM
Sbjct: 113 -----YFYEL------------------QGSTSVALYGLGNIRDERLNRMFQTPHAVQWM 149

Query: 181 RPESQEGCQVSDWFNILVLHQNRVKMNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVS 240
           RPESQEGCQ                                                EV 
Sbjct: 150 RPESQEGCQ------------------------------------------------EVP 161

Query: 241 GMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLKSVRPFEYTEIILKDE 300
           GMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPL SVRPFEYTE+ILKDE
Sbjct: 162 GMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLMSVRPFEYTEVILKDE 221

Query: 301 PDIDPNDQHSILEHLDKV----VGKLIEKSSKQAVHRAELKLPLIRIKVDYSGFMTINPQ 356
           PDIDPNDQ SILEHLDKV    VGKLIEKSSKQ ++R ELKLPLIRIKVDYSGFMTINPQ
Sbjct: 222 PDIDPNDQSSILEHLDKVKMIQVGKLIEKSSKQVINRKELKLPLIRIKVDYSGFMTINPQ 281

Query: 357 RFGQKYVGK------------VANPQDILIFSKSAKKAK--NEGKIDDSERLRPEELNQQ 402
           RFGQKYVGK            + +   + I     K      + KIDDSERLRPEELNQQ
Sbjct: 282 RFGQKYVGKKFRISIRDKLKELCSLGCLAILRIMCKTYAIFFKRKIDDSERLRPEELNQQ 341

Query: 403 NIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRNKIAKDSDNLQ 462
           NIEALVAE+NLKMEILPVNDLDIAL NFVNKDDKMAFY+CV+ NI ETR           
Sbjct: 342 NIEALVAESNLKMEILPVNDLDIALQNFVNKDDKMAFYSCVKYNIEETR----------- 390

Query: 463 FDNEDLVVKVGECLEERVKERSVLSKEPTQFTAGAQSLEDFR---AAGAGSAVSFSDDED 519
                          ERVKERSV SKEPTQ TA AQ  +DF+   AAG GSAVSFSDDED
Sbjct: 391 ---------------ERVKERSVHSKEPTQLTADAQPWKDFQGRSAAGTGSAVSFSDDED 435

Query: 520 AMPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKQTTLDGALGFRXXXXXXX 579
           AMP+                                    +KQTT+DGALGFR       
Sbjct: 436 AMPVSSSKPSTRGRKGSSGASQTTTRGRGRGRGRGRGSSTMKQTTIDGALGFRVSQRSAS 495

Query: 580 XXXXXXIRSVADGGDNLASASSDDAIQNAVEGVDDSSENESKLXXXXXXXXXXXXXXSNQ 639
                 IRS AD  DNLASASSDDA +N VE +DDSSENES L              S Q
Sbjct: 496 VAAATAIRSGAD-DDNLASASSDDANKNDVEEIDDSSENESNLPGQKRAASKGRGRGSTQ 554

Query: 640 PSNSKRGRKSENSSVHRMLMXXXXXXXXXXXXVRKRLNKSQPRVT 684
             +SKRGRKS+NSS+HRML+            +RKRLNKSQPR +
Sbjct: 555 --SSKRGRKSDNSSIHRMLVNNDDDDDDDDTDIRKRLNKSQPRYS 597


>Glyma14g12420.1 
          Length = 244

 Score =  224 bits (570), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 107/125 (85%), Positives = 112/125 (89%)

Query: 204 VKMNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVSGMGFHISQPGSSVATSLIDGESK 263
           VK+NPKNAINEHFLP FLDFIVWGHEHECLVDPQEV GMGFHISQPGSSVATSLIDGESK
Sbjct: 52  VKINPKNAINEHFLPCFLDFIVWGHEHECLVDPQEVPGMGFHISQPGSSVATSLIDGESK 111

Query: 264 PKHVLLLEIKGNQYRPTKIPLKSVRPFEYTEIILKDEPDIDPNDQHSILEHLDKVVGKLI 323
           PKHVLL EIKGNQY PTKIPL SVRPF+YTE+ILKD+ DIDPNDQ SILEHLDKVV  L 
Sbjct: 112 PKHVLLQEIKGNQYLPTKIPLMSVRPFKYTEVILKDKSDIDPNDQSSILEHLDKVVLNLF 171

Query: 324 EKSSK 328
              S+
Sbjct: 172 WDYSE 176


>Glyma12g13940.1 
          Length = 78

 Score =  134 bits (337), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/77 (77%), Positives = 67/77 (87%)

Query: 111 NLSVVDILSACNLVNYFGKTVLGGSGVGQITLHPILIKKGSTAVALYGLGNIRDERLNRM 170
           NL VV+I  AC+LVNYFGK VLGGS VGQIT++PI IKKGS +V LYGLGNIRDE+LNRM
Sbjct: 1   NLYVVNIFLACDLVNYFGKIVLGGSSVGQITINPIFIKKGSRSVTLYGLGNIRDEKLNRM 60

Query: 171 FQTPHAVQWMRPESQEG 187
           FQTPH  QWMRP+SQEG
Sbjct: 61  FQTPHVGQWMRPKSQEG 77