Miyakogusa Predicted Gene

Lj1g3v1583620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1583620.1 Non Chatacterized Hit- tr|H9GCF3|H9GCF3_ANOCA
Uncharacterized protein OS=Anolis carolinensis
GN=UBE4,54.55,2e-19,RING/U-box,NULL; U-box,U box domain; Modified RING
finger domain,U box domain; no description,Zinc
f,NODE_51503_length_588_cov_139.940475.path1.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g05850.1                                                       196   4e-51
Glyma19g03370.1                                                       195   8e-51
Glyma13g05850.2                                                       101   1e-22

>Glyma13g05850.1 
          Length = 1038

 Score =  196 bits (498), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 103/110 (93%), Gaps = 4/110 (3%)

Query: 1    MDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDASDPFNRSHLTA 60
            MD EATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLTA
Sbjct: 933  MDTEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTA 992

Query: 61   DMLIPDVELKARIEEFVRSQEMKKHGEGLSIQSSSKATIQTTNGEKMLID 110
            DMLIPD ELKARIEEFVRSQEMKKH   LS+Q S+KATIQTTNGE MLID
Sbjct: 993  DMLIPDDELKARIEEFVRSQEMKKH---LSLQ-STKATIQTTNGETMLID 1038


>Glyma19g03370.1 
          Length = 1036

 Score =  195 bits (496), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 103/110 (93%), Gaps = 4/110 (3%)

Query: 1    MDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDASDPFNRSHLTA 60
            MDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLTA
Sbjct: 931  MDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTA 990

Query: 61   DMLIPDVELKARIEEFVRSQEMKKHGEGLSIQSSSKATIQTTNGEKMLID 110
            DMLIPD  LKARIEEFVRSQEMKKH   LS+Q S+KATIQTTNGE ML+D
Sbjct: 991  DMLIPDDALKARIEEFVRSQEMKKH---LSLQ-STKATIQTTNGETMLVD 1036


>Glyma13g05850.2 
          Length = 986

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 1   MDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDA 49
           MD EATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSD+
Sbjct: 933 MDTEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDS 981