Miyakogusa Predicted Gene

Lj1g3v1582550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1582550.1 Non Chatacterized Hit- tr|D7LZ75|D7LZ75_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,66.35,2e-18,seg,NULL; no description,Rho GTPase-activating
protein domain; RhoGAP,Rho GTPase-activating protein ,CUFF.27538.1
         (342 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09860.1                                                       335   4e-92
Glyma04g09780.1                                                       301   6e-82
Glyma02g44780.1                                                        80   3e-15
Glyma02g44780.2                                                        80   3e-15
Glyma14g03960.1                                                        79   5e-15
Glyma14g03960.2                                                        79   6e-15

>Glyma06g09860.1 
          Length = 929

 Score =  335 bits (859), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 203/344 (59%), Positives = 230/344 (66%), Gaps = 9/344 (2%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MRAAINDTFPEPN            TVASRK VNRMSSSAVAACMAPLLLRPLLAGECEI
Sbjct: 277 MRAAINDTFPEPNRRLLQRILMMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEI 336

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSVSPDIYTDXXXXXXXXX 120
           ENDFDVGGDGS+              I ITLLEEY++IFG GSVSPDIYTD         
Sbjct: 337 ENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGGGSVSPDIYTDSEEESGSES 396

Query: 121 XXXXXXXXXXXXXXXXXXXXXXG---SSQESDADDDHVSESYSGSGESDVDNTPNKKDHD 177
                                     S  ESDADDD VSESYSG+ +S+ D+    +DHD
Sbjct: 397 EGATDDDDDDDDDDDYEDDDDDEQDESIHESDADDDLVSESYSGTVDSEADD----EDHD 452

Query: 178 HXXXXXXXXXXXEENKAKPKLKTKSLEGSPTQPDEFKSCENLASPKKSGYADHSNKPADI 237
           H           E+ KA  KL +KSLEGS TQ ++FKS E + S KK+GY D SNKPADI
Sbjct: 453 HASSSSKSSGKSEKLKATRKLSSKSLEGSLTQHEDFKSSELVTSSKKTGYIDQSNKPADI 512

Query: 238 VGELSTDQAALHNSDFPSPTSCIRKSNTISNGPTTRHR-IMGRTAARKNLSMESIDFSVD 296
           VG +ST+QA LHNS+ PSP SCI+KSNT+SNGP  RHR  +GRT+ARKNLSMESIDF + 
Sbjct: 513 VGGVSTNQATLHNSNSPSPASCIKKSNTMSNGPAPRHRTTLGRTSARKNLSMESIDFPL- 571

Query: 297 EDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKKSLHER 340
           ED D IERLEA++ ELQ +I EEVKAN KLQSH+D QKK+L ER
Sbjct: 572 EDEDEIERLEAARTELQTQIDEEVKANEKLQSHVDKQKKALEER 615


>Glyma04g09780.1 
          Length = 845

 Score =  301 bits (771), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 187/344 (54%), Positives = 218/344 (63%), Gaps = 26/344 (7%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MRAAINDTFPEPN            TVASRK VNRMSSSAVAACMAPLLLRPLLAGECEI
Sbjct: 259 MRAAINDTFPEPNRRLLQRILMMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEI 318

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSVSPDIYTDXXXXXXXXX 120
           ENDFDVGGDGS+              I ITLLEEY++IFGEGSV+PDIYTD         
Sbjct: 319 ENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGEGSVTPDIYTDSEEESGSES 378

Query: 121 XXXXXXXXXXXXXXXXXXXXXXGSS---QESDADDDHVSESYSGSGESDVDNTPNKKDHD 177
                                        ESDADDD VSESYSG+G+S+ D+    +DHD
Sbjct: 379 EEATDDDDDDDDLSYDYDDDDDEQDESIHESDADDDLVSESYSGTGDSEADD----EDHD 434

Query: 178 HXXXXXXXXXXXEENKAKPKLKTKSLEGSPTQPDEFKSCENLASPKKSGYADHSNKPADI 237
           H           E+ KA  KL +KSLEGS TQ ++ KS E++                  
Sbjct: 435 HASSSSKSSGKSEKLKASRKLSSKSLEGSLTQHEDIKSLEHVP----------------- 477

Query: 238 VGELSTDQAALHNSDFPSPTSCIRKSNTISNGPTTRHR-IMGRTAARKNLSMESIDFSVD 296
           +G +STD+A LHNS+ PSP SCI+KSNT+SNGP  RHR I+GRT+ARKNLSMESIDF + 
Sbjct: 478 IGGVSTDEATLHNSNSPSPASCIKKSNTMSNGPAPRHRTILGRTSARKNLSMESIDFPI- 536

Query: 297 EDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKKSLHER 340
           ED D IERLEA++ ELQ +I +EVKAN +LQSH+D QKK+L ER
Sbjct: 537 EDEDEIERLEAARTELQTQIDKEVKANEQLQSHVDKQKKALEER 580


>Glyma02g44780.1 
          Length = 860

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 62/104 (59%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+ S    NRM+ SAVAACMAPLLLRPLLAGECE+
Sbjct: 264 MRCAILETFPEPNRRLLQRILKMMHTIGSHSQENRMTPSAVAACMAPLLLRPLLAGECEL 323

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FD  GD S               I+ TLLEEY +IF E ++
Sbjct: 324 EDEFDASGDSSAQLLAAANAANNAQAIITTLLEEYESIFDEENI 367



 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%)

Query: 276 IMGRT-AARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQK 334
             GR+   RK  S+ES+D S +E+   I+RLE +K +LQ+ IA+E + NA LQ+ ++ +K
Sbjct: 543 FWGRSNQPRKTPSVESVDSSGEEEL-AIQRLEIAKNDLQHRIAKEARGNAILQASLERRK 601

Query: 335 KSLHERR 341
           ++LHERR
Sbjct: 602 QALHERR 608


>Glyma02g44780.2 
          Length = 859

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 62/104 (59%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+ S    NRM+ SAVAACMAPLLLRPLLAGECE+
Sbjct: 264 MRCAILETFPEPNRRLLQRILKMMHTIGSHSQENRMTPSAVAACMAPLLLRPLLAGECEL 323

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FD  GD S               I+ TLLEEY +IF E ++
Sbjct: 324 EDEFDASGDSSAQLLAAANAANNAQAIITTLLEEYESIFDEENI 367



 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 276 IMGRTAARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKK 335
             GR+  RK  S+ES+D S +E+   I+RLE +K +LQ+ IA+E + NA LQ+ ++ +K+
Sbjct: 543 FWGRSNPRKTPSVESVDSSGEEEL-AIQRLEIAKNDLQHRIAKEARGNAILQASLERRKQ 601

Query: 336 SLHERR 341
           +LHERR
Sbjct: 602 ALHERR 607


>Glyma14g03960.1 
          Length = 866

 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 61/104 (58%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+ S    NRM+ SA+AACMAPLLLRPLLAGECE+
Sbjct: 274 MRCAILETFPEPNRRLLQRILKMMHTIGSHSQENRMTPSAIAACMAPLLLRPLLAGECEL 333

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FD  GD S               I+ TLLEEY  IF E ++
Sbjct: 334 EDEFDASGDSSAQLLAAANAANNAQAIITTLLEEYENIFDEENI 377



 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 276 IMGRTAARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKK 335
             GR+  RK  S+ES+D S +E+   I+RLE +K++LQ  IA+E + NA LQ+ ++ +K+
Sbjct: 553 FWGRSNPRKTPSVESVDSSGEEEL-AIQRLEIAKSDLQLRIAKEARGNAILQASLERRKQ 611

Query: 336 SLHERR 341
           +LHERR
Sbjct: 612 ALHERR 617


>Glyma14g03960.2 
          Length = 764

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 61/104 (58%)

Query: 1   MRAAINDTFPEPNXXXXXXXXXXXXTVASRKTVNRMSSSAVAACMAPLLLRPLLAGECEI 60
           MR AI +TFPEPN            T+ S    NRM+ SA+AACMAPLLLRPLLAGECE+
Sbjct: 272 MRCAILETFPEPNRRLLQRILKMMHTIGSHSQENRMTPSAIAACMAPLLLRPLLAGECEL 331

Query: 61  ENDFDVGGDGSIXXXXXXXXXXXXXXIVITLLEEYNTIFGEGSV 104
           E++FD  GD S               I+ TLLEEY  IF E ++
Sbjct: 332 EDEFDASGDSSAQLLAAANAANNAQAIITTLLEEYENIFDEENI 375



 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 276 IMGRTAARKNLSMESIDFSVDEDGDGIERLEASKAELQNEIAEEVKANAKLQSHIDDQKK 335
             GR+  RK  S+ES+D S +E+   I+RLE +K++LQ  IA+E + NA LQ+ ++ +K+
Sbjct: 551 FWGRSNPRKTPSVESVDSSGEEEL-AIQRLEIAKSDLQLRIAKEARGNAILQASLERRKQ 609

Query: 336 SLHERR 341
           +LHERR
Sbjct: 610 ALHERR 615