Miyakogusa Predicted Gene

Lj1g3v1582540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1582540.1 Non Chatacterized Hit- tr|K4D9A0|K4D9A0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,75.44,8e-17,RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN,NULL; no
description,Rho GTPase-activating protein domain; Rho,CUFF.27537.1
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09780.1                                                       223   3e-59
Glyma06g09860.1                                                       187   3e-48
Glyma14g03960.1                                                       181   2e-46
Glyma14g03960.2                                                       180   3e-46
Glyma02g44780.1                                                       164   2e-41
Glyma02g44780.2                                                       164   2e-41

>Glyma04g09780.1 
          Length = 845

 Score =  223 bits (569), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 105/117 (89%), Positives = 113/117 (96%)

Query: 2   EQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEEH 61
           EQNGI RNDQ DSIDISLDQLKDR+P KSTV+GRPILLALEDVDGTPSFLEKAL FIEEH
Sbjct: 121 EQNGIFRNDQTDSIDISLDQLKDREPVKSTVVGRPILLALEDVDGTPSFLEKALTFIEEH 180

Query: 62  GASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           GA++EGILRQAADVD+VERRVREYEQGK++FSPDEDAHV+GDCVKHVIRELPSSPVP
Sbjct: 181 GANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVP 237


>Glyma06g09860.1 
          Length = 929

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 86/102 (84%), Positives = 97/102 (95%)

Query: 17  ISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEEHGASVEGILRQAADVD 76
           ++   +KDR+P KSTV+GRPILLALEDVDGTPSFLEKAL FIEEHGA++EGILRQAADVD
Sbjct: 154 VTEQNVKDREPVKSTVVGRPILLALEDVDGTPSFLEKALTFIEEHGANIEGILRQAADVD 213

Query: 77  DVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           +VERRVREYEQGK++FSPDEDAHV+GDCVKHVIRELPSSPVP
Sbjct: 214 EVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVP 255


>Glyma14g03960.1 
          Length = 866

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 102/118 (86%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI R+D +DSI+ S  Q +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 134 MGHNGIFRSDASDSIEGSFHQWRDKRPIKSLVVGRPILLALEDIDGGPSFLEKALQFLEK 193

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           +G  VEGILRQ+ADV++V+RRV+EYEQGK +F P+EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 194 YGTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVP 251


>Glyma14g03960.2 
          Length = 764

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 102/118 (86%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI R+D +DSI+ S  Q +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 132 MGHNGIFRSDASDSIEGSFHQWRDKRPIKSLVVGRPILLALEDIDGGPSFLEKALQFLEK 191

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           +G  VEGILRQ+ADV++V+RRV+EYEQGK +F P+EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 192 YGTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVP 249


>Glyma02g44780.1 
          Length = 860

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 95/118 (80%), Gaps = 10/118 (8%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI R+D            +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 134 MGHNGIFRSDAR----------RDKRPIKSLVVGRPILLALEDIDGGPSFLEKALRFLEK 183

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           +G  VEGILRQ+ADV++V+RRV+EYEQGK +F P+EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 184 YGTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVP 241


>Glyma02g44780.2 
          Length = 859

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 95/118 (80%), Gaps = 10/118 (8%)

Query: 1   MEQNGILRNDQNDSIDISLDQLKDRDPPKSTVIGRPILLALEDVDGTPSFLEKALKFIEE 60
           M  NGI R+D            +D+ P KS V+GRPILLALED+DG PSFLEKAL+F+E+
Sbjct: 134 MGHNGIFRSDAR----------RDKRPIKSLVVGRPILLALEDIDGGPSFLEKALRFLEK 183

Query: 61  HGASVEGILRQAADVDDVERRVREYEQGKIDFSPDEDAHVIGDCVKHVIRELPSSPVP 118
           +G  VEGILRQ+ADV++V+RRV+EYEQGK +F P+EDAHV+GDCVKHV+RELPSSPVP
Sbjct: 184 YGTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVP 241