Miyakogusa Predicted Gene

Lj1g3v1560080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1560080.1 Non Chatacterized Hit- tr|D7KY94|D7KY94_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,39.02,2e-18,
,TC72047.path1.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10050.1                                                       181   2e-46
Glyma04g10060.2                                                       164   3e-41
Glyma04g10060.1                                                       164   3e-41
Glyma06g10060.1                                                       161   3e-40
Glyma04g10050.1                                                       108   3e-24
Glyma09g33170.1                                                        67   9e-12
Glyma01g02840.1                                                        63   1e-10

>Glyma06g10050.1 
          Length = 660

 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/154 (64%), Positives = 115/154 (74%), Gaps = 5/154 (3%)

Query: 3   YLGSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSALLFSGLHAP 62
           +  S+ LS  VRL Y+++  CSFC +PL GDRLCFV I+L P  LRQ+SSAL  S L  P
Sbjct: 12  HFTSIRLSRDVRL-YSNNGNCSFCHKPLRGDRLCFVAISLLPHGLRQDSSAL-HSRLRTP 69

Query: 63  LKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGIIGF 121
           L+PVP RCN L  R  L PAGG E PLVK A +SLSRSYNAI+ +P ++QLIPALGIIGF
Sbjct: 70  LRPVPLRCNALPWRCSLMPAGGCETPLVKVAAVSLSRSYNAIAGKPSVIQLIPALGIIGF 129

Query: 122 AFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           A FGLEP LRLSR LFLQ+R D  WKKSSS YI+
Sbjct: 130 AVFGLEPLLRLSRNLFLQERTD--WKKSSSHYIL 161


>Glyma04g10060.2 
          Length = 681

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 4/153 (2%)

Query: 5   GSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSAL-LFSGLHAPL 63
           GS  LSH VR  Y++   CSF    +   RL  VT+NLSP SL+Q+SSAL L S  HAP+
Sbjct: 5   GSTKLSHDVRF-YSNTGFCSFHHNRMGVGRLHLVTLNLSPCSLKQDSSALHLLSRPHAPI 63

Query: 64  KPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGIIGFA 122
           + VPSRCNV +C+SVL P GG   PL+K+A++ L+RSY+A+   P  LQLIPA+GII FA
Sbjct: 64  RHVPSRCNVFICQSVLIPGGGSGTPLMKSASVILTRSYDALQGNPTFLQLIPAIGIIAFA 123

Query: 123 FFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
             GLEP LRLSRVLFLQ   D SWKKSSSRYIM
Sbjct: 124 VCGLEPLLRLSRVLFLQS-TDSSWKKSSSRYIM 155


>Glyma04g10060.1 
          Length = 681

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 4/153 (2%)

Query: 5   GSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSAL-LFSGLHAPL 63
           GS  LSH VR  Y++   CSF    +   RL  VT+NLSP SL+Q+SSAL L S  HAP+
Sbjct: 5   GSTKLSHDVRF-YSNTGFCSFHHNRMGVGRLHLVTLNLSPCSLKQDSSALHLLSRPHAPI 63

Query: 64  KPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGIIGFA 122
           + VPSRCNV +C+SVL P GG   PL+K+A++ L+RSY+A+   P  LQLIPA+GII FA
Sbjct: 64  RHVPSRCNVFICQSVLIPGGGSGTPLMKSASVILTRSYDALQGNPTFLQLIPAIGIIAFA 123

Query: 123 FFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
             GLEP LRLSRVLFLQ   D SWKKSSSRYIM
Sbjct: 124 VCGLEPLLRLSRVLFLQS-TDSSWKKSSSRYIM 155


>Glyma06g10060.1 
          Length = 681

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 4/153 (2%)

Query: 5   GSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLSPVSLRQNSSAL-LFSGLHAPL 63
           GS  LSH VRL  ++   CSF    +   RL  VTINLSP +L+Q+SSA  L S LHAP+
Sbjct: 5   GSTQLSHDVRL-NSNIGFCSFHHNRMGVGRLHLVTINLSPSNLKQDSSAFHLLSRLHAPI 63

Query: 64  KPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-RPILLQLIPALGIIGFA 122
           + VPSRCNV +CRSVL P GG   PL+K+A++ L+RSY+A+   PI LQLIPA+GII FA
Sbjct: 64  RHVPSRCNVFICRSVLIPGGGSGTPLMKSASVILTRSYDALQGNPIFLQLIPAIGIIAFA 123

Query: 123 FFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
             GLEP LRLSRVLFLQ   D SWKKSSS+ IM
Sbjct: 124 VCGLEPLLRLSRVLFLQS-TDISWKKSSSQSIM 155


>Glyma04g10050.1 
          Length = 396

 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 78/120 (65%), Gaps = 20/120 (16%)

Query: 48  RQNSSALLFSGLHAPLKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAIS-R 106
           RQ+S ALL S L  PL+PVP RCN L  +  L PAGG EAPL+        RSYNAI+ +
Sbjct: 1   RQDSLALL-SRLWTPLRPVPLRCNALPWQCSLIPAGGCEAPLI-------CRSYNAIAGK 52

Query: 107 PILLQLIPALGIIGFAFFGLEPFLRLSRVLFLQD-----------RVDRSWKKSSSRYIM 155
           P ++Q IPALGIIGFA FGLEP LRLSR LFLQ+               +WKKSSSRYI+
Sbjct: 53  PSVIQFIPALGIIGFAVFGLEPLLRLSRNLFLQEVSILSYCMFCLNQLNNWKKSSSRYIL 112


>Glyma09g33170.1 
          Length = 719

 Score = 66.6 bits (161), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 9/159 (5%)

Query: 1   MAYLGSMGLSHGVRLLYTSDRKCSFCQRPLPGDRLCFVTINLS-PVS-LRQNSSALL-FS 57
           MA  GS+ LSHG+ L    D  C+   R     +L   +   S P+S +RQ         
Sbjct: 1   MALPGSLQLSHGLGLCRNLD--CNKHSRAADHGKLHLYSAGPSYPISFMRQECRGFQHLR 58

Query: 58  GLHAPLKPVPSRCNVLLCRSVLTPAGGFEAPLVKAATISLSRSYNAI-SRPILLQLIPAL 116
            ++ P   +  +     C   L      E P VK A   L+RS N + + P +++LIPA+
Sbjct: 59  HINRPAHTLSCKSRSFKCHCFLGQPN--ELPAVKVAATVLARSCNVLQNSPTIVKLIPAV 116

Query: 117 GIIGFAFFGLEPFLRLSRVLFLQDRVDRSWKKSSSRYIM 155
           G+I FA +G+ P L  +R L  Q R D SWK+S++ YI+
Sbjct: 117 GVIIFAVWGVGPLLFQTRKLLFQ-RSDSSWKRSTTYYII 154


>Glyma01g02840.1 
          Length = 658

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)

Query: 88  PLVKAATISLSRSYNAI-SRPILLQLIPALGIIGFAFFGLEPFLRLSRVLFLQDRVDRSW 146
           P VK A   L+RS N + + PI+++LIPA+G+I FA +G+ P L  +R L  Q R D SW
Sbjct: 47  PAVKVAATVLARSCNILQNSPIIVKLIPAVGVIIFAIWGVGPLLFQTRKLLFQ-RSDSSW 105

Query: 147 KKSSSRYIM 155
           KKS++ YI+
Sbjct: 106 KKSTTYYIV 114