Miyakogusa Predicted Gene
- Lj1g3v1560060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1560060.1 tr|G7J535|G7J535_MEDTR MscS family inner membrane
protein ynaI OS=Medicago truncatula GN=MTR_3g10028,83.4,0,seg,NULL;
Sm-like ribonucleoproteins,Like-Sm (LSM) domain;
MS_channel,Mechanosensitive ion channel M,CUFF.27580.1
(468 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g10060.2 706 0.0
Glyma04g10060.1 706 0.0
Glyma06g10060.1 700 0.0
Glyma06g10050.1 495 e-140
Glyma09g33170.1 493 e-139
Glyma01g02840.1 412 e-115
Glyma04g10050.1 231 9e-61
>Glyma04g10060.2
Length = 681
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/470 (76%), Positives = 381/470 (81%), Gaps = 22/470 (4%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
MGLDFAGK LFMELLGFSTQKW REIFTNFLSSIM
Sbjct: 232 MGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIM 291
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPFI+NEWIQTKIEGYEVSGTVEHVGWWSPTI+RGDDREAVHIPNHKFTVNVVRNL
Sbjct: 292 IHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNL 351
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
SQK+HWRIKSYIAISHLDVNKIN IVADMRKVL+KNPQVEQQ+LHRRVFLENVNPENQ+L
Sbjct: 352 SQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQAL 411
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIY EA+SENIPFG
Sbjct: 412 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFG 471
Query: 241 DTIFSRSRAAVNRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEKDAKLDEIVVSDSNGDDN 300
DTIF+RS A NRPFLLIEP YKVNGEDK KPSTRST +EEKD ++DE + SD+ D+N
Sbjct: 472 DTIFTRSSAG-NRPFLLIEPLYKVNGEDKTKPSTRSTRASEEKDFRIDETMASDTKEDEN 530
Query: 301 LAATSTSPPGVNSKDKSKSISGVPNQNMGSDSSVEKTSKTMQPKKESAGDVRKGSAVPAS 360
AAT TS P VNSKDKSKS+S QPKKE+A D KG VP S
Sbjct: 531 FAATLTSSPDVNSKDKSKSLS------------------EAQPKKENAVDAGKGPTVPVS 572
Query: 361 KNLSQSAVPEISPVTSHE--SGTASQSKQDGEKSSVTSSPVRSPLEENILLEVALEGSKR 418
KNL QSA PE SPVTSHE S T+SQSKQD EKSSV S VR LEENILL VA+EGSKR
Sbjct: 573 KNLVQSAAPETSPVTSHEINSATSSQSKQDEEKSSVPLSSVRPSLEENILLGVAIEGSKR 632
Query: 419 TLPIEEEMTSSPTPAESQEFAVQRNGSGPPSNKDKKDGPISSFPTTKQNE 468
TLPIEEEMT SP PAESQEFAVQRNG GPP++KDKKDG SSFPT+KQN+
Sbjct: 633 TLPIEEEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQ-SSFPTSKQND 681
>Glyma04g10060.1
Length = 681
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/470 (76%), Positives = 381/470 (81%), Gaps = 22/470 (4%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
MGLDFAGK LFMELLGFSTQKW REIFTNFLSSIM
Sbjct: 232 MGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIM 291
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPFI+NEWIQTKIEGYEVSGTVEHVGWWSPTI+RGDDREAVHIPNHKFTVNVVRNL
Sbjct: 292 IHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNL 351
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
SQK+HWRIKSYIAISHLDVNKIN IVADMRKVL+KNPQVEQQ+LHRRVFLENVNPENQ+L
Sbjct: 352 SQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQAL 411
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIY EA+SENIPFG
Sbjct: 412 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFG 471
Query: 241 DTIFSRSRAAVNRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEKDAKLDEIVVSDSNGDDN 300
DTIF+RS A NRPFLLIEP YKVNGEDK KPSTRST +EEKD ++DE + SD+ D+N
Sbjct: 472 DTIFTRSSAG-NRPFLLIEPLYKVNGEDKTKPSTRSTRASEEKDFRIDETMASDTKEDEN 530
Query: 301 LAATSTSPPGVNSKDKSKSISGVPNQNMGSDSSVEKTSKTMQPKKESAGDVRKGSAVPAS 360
AAT TS P VNSKDKSKS+S QPKKE+A D KG VP S
Sbjct: 531 FAATLTSSPDVNSKDKSKSLS------------------EAQPKKENAVDAGKGPTVPVS 572
Query: 361 KNLSQSAVPEISPVTSHE--SGTASQSKQDGEKSSVTSSPVRSPLEENILLEVALEGSKR 418
KNL QSA PE SPVTSHE S T+SQSKQD EKSSV S VR LEENILL VA+EGSKR
Sbjct: 573 KNLVQSAAPETSPVTSHEINSATSSQSKQDEEKSSVPLSSVRPSLEENILLGVAIEGSKR 632
Query: 419 TLPIEEEMTSSPTPAESQEFAVQRNGSGPPSNKDKKDGPISSFPTTKQNE 468
TLPIEEEMT SP PAESQEFAVQRNG GPP++KDKKDG SSFPT+KQN+
Sbjct: 633 TLPIEEEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQ-SSFPTSKQND 681
>Glyma06g10060.1
Length = 681
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/470 (75%), Positives = 380/470 (80%), Gaps = 22/470 (4%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
MGLDFAGK LFMELLGFSTQKW REIFTNFLSSIM
Sbjct: 232 MGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIM 291
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPFI+NEWIQTKIEGYEVSGTVEHVGWWSPTI+RGDDREAVHIPNHKFTVNVVRNL
Sbjct: 292 IHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNL 351
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
SQK+HWRIKSYIAISHLDVNK+N IVADMRKVL+KNPQVEQQ+LHRRVFLENVNPENQ+L
Sbjct: 352 SQKSHWRIKSYIAISHLDVNKVNNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQAL 411
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIY EA+SENIPFG
Sbjct: 412 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFG 471
Query: 241 DTIFSRSRAAVNRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEKDAKLDEIVVSDSNGDDN 300
DTIF+RSRAA NRPFLLIEP YKVNGEDKVK STRST NEEKD+K+DE + SD+ D+N
Sbjct: 472 DTIFTRSRAA-NRPFLLIEPPYKVNGEDKVKASTRSTRANEEKDSKIDETMASDTKEDEN 530
Query: 301 LAATSTSPPGVNSKDKSKSISGVPNQNMGSDSSVEKTSKTMQPKKESAGDVRKGSAVPAS 360
ATSTS P V SKDKSKS+S QPKKE+A D KG+ VP S
Sbjct: 531 FTATSTSSPDVISKDKSKSLSDA------------------QPKKENAVDAGKGTTVPVS 572
Query: 361 KNLSQSAVPEISPVTSHE--SGTASQSKQDGEKSSVTSSPVRSPLEENILLEVALEGSKR 418
KNL QSAVPE S T+ E S T+SQSKQD EKSSV+ VR LEENILL VA+EGSKR
Sbjct: 573 KNLVQSAVPEASLATTQEITSATSSQSKQDEEKSSVSLPSVRPSLEENILLGVAIEGSKR 632
Query: 419 TLPIEEEMTSSPTPAESQEFAVQRNGSGPPSNKDKKDGPISSFPTTKQNE 468
TLPIE EMT SP PAESQEFAVQRNG GPP++KDKKDG SSFPT KQN+
Sbjct: 633 TLPIEGEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQ-SSFPTGKQND 681
>Glyma06g10050.1
Length = 660
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/470 (59%), Positives = 324/470 (68%), Gaps = 49/470 (10%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
M +DF GK LFMELLGFSTQKW REIFTNFLSSIM
Sbjct: 238 MRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLISLAGREIFTNFLSSIM 297
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPF++NE IQTKI+GYEV+G VEHVGWWSPTIVRG D EAVHIPNH +VNVVRNL
Sbjct: 298 IHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNL 357
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
S+K+HWRIK+++AISHLDVNKIN I+ADMRKVLAKNPQVEQ++LHRRVFLEN++PENQ+L
Sbjct: 358 SKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQKKLHRRVFLENIDPENQAL 417
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
MIL+SCFVKT H EEYL VKEAILLDLLRV+SHHRARLATPIRTVQK+ + + + PF
Sbjct: 418 MILVSCFVKTRHSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMCSDTDLDVDPFD 477
Query: 241 DTIFSRSRAAVNRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEKDAKLDEIVVSDSNGD-D 299
DTI +RSR+ NRPF LI P Y KVKP ST+ NE+KD K+DE + SD + D
Sbjct: 478 DTIPTRSRSKNNRPFPLINPPY------KVKP---STTTNEDKDTKIDETLPSDFKVERD 528
Query: 300 NLAATSTSPPGVNSKDKSKSISGVPNQNMGSDSSVEKTSKTMQPKKESAGDVRKGSAVPA 359
AATS SSV+KTSK+ + KKE G KG+
Sbjct: 529 KFAATS--------------------------SSVQKTSKSQKLKKERVGSSEKGT---T 559
Query: 360 SKNLSQSAVPEISPVTSHESG-TASQSKQDGEKSSVTSSPVRSPLEENILLEVALEGSKR 418
SKNLS+S SG T S SK D EKS ++SS LEENI+L+ AL GSKR
Sbjct: 560 SKNLSKS--------NEFGSGETTSPSKLDEEKSVMSSSSASHSLEENIVLDAALLGSKR 611
Query: 419 TLPIEEEMTSSPTPAESQEFAVQRNGSGPPSNKDKKDGPISSFPTTKQNE 468
TL I+EE+ S PAE QE AV ++GS PP +KDKKDG +SSFPT KQ +
Sbjct: 612 TLAIDEELIQS-IPAEPQEVAVHQDGSEPPISKDKKDGEMSSFPTPKQKD 660
>Glyma09g33170.1
Length = 719
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/492 (54%), Positives = 320/492 (65%), Gaps = 41/492 (8%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
MG FAGK LFMELLGFSTQKW REIFTNFLSS+M
Sbjct: 231 MGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVM 290
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPF++NEWIQTKIEGYEVSGTVEHVGWWSPTI+RG+DREAVHIPNHKFTVNVVRNL
Sbjct: 291 IHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNL 350
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
SQKTHWRIK+++AISHLDVNKIN IVADMRKVLAKNPQVEQQRLHRRVFL+N+NPENQ+L
Sbjct: 351 SQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQAL 410
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
+IL+SCFVKTSHFEEYLCVKEA+LLDLLRV+ HHRARLATP+RT+QKIY +A+ ENIPF
Sbjct: 411 LILVSCFVKTSHFEEYLCVKEAVLLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFA 470
Query: 241 DTIFSRSRAAV-NRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEK-------DAKLDEIVV 292
D+ F R V NRP L+IEP YK+NG+DK S R + K D + D VV
Sbjct: 471 DSTFGRGAGTVPNRPLLVIEPSYKINGDDKKSRSARPAVDQDNKTATRTKVDTEGDNKVV 530
Query: 293 ---SDSNGDDNLAATSTSPPGVNSKDKSKSISGVPNQNMG------SDSSVEKTSKTMQP 343
SD+NG+ T S NSK ++ P+ +G SDSS E P
Sbjct: 531 TPNSDANGNSKTVVTPNSDANGNSK---TVVTPKPDPEVGENKPLKSDSSRENVEVPESP 587
Query: 344 KKESAGDVRKGSAVPASKNLSQSAV-------PEISPVTSHESGTASQS----------- 385
K + ++ ++ Q+ V P I S + + +
Sbjct: 588 SKSKVTGLVVDNSAQKDVDVKQAKVHTTKNTKPNIDSDNVVSSSSTNNADKTGGFNTNMP 647
Query: 386 -KQDGEKS-SVTSSPVRSPLEENILLEVALEGSKRTLPIEEEMTSSPTPAESQEFAVQRN 443
KQ GEK + R+ LEENI+L VALEGSKRTLPI+EE+ + T E++E A ++
Sbjct: 648 MKQQGEKKPAAQPHASRTVLEENIVLGVALEGSKRTLPIDEEI-DNVTSREAKEMAALQS 706
Query: 444 GSGPPSNKDKKD 455
G+G P D D
Sbjct: 707 GNGSPKAPDGND 718
>Glyma01g02840.1
Length = 658
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/487 (50%), Positives = 298/487 (61%), Gaps = 52/487 (10%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
MG FAGK LFMELLGFSTQKW REIFTNFLSS+M
Sbjct: 191 MGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVM 250
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPF++NEWIQTKIEGYEVSGTVEHVGWWSPTI+RG+DREAVHIPNHKFTVNVVRNL
Sbjct: 251 IHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNL 310
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
SQKTHWRIK+++AISHLDVNKIN IVADMRKVLAKNPQVEQQRLHRRVFL+N+NPENQ+
Sbjct: 311 SQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQA- 369
Query: 181 MILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYREAESENIPFG 240
+ EAILLDLLRV+ HHRARLATP+RT+QKIY +A+ ENIPF
Sbjct: 370 ------------------LLEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFA 411
Query: 241 DTIFSRSRAAV-NRPFLLIEPQYKVNGEDKVKPSTRSTSGNEEKDA---KLDEIV--VSD 294
D+ F V +RP L+IEP YK+NG+DK + R + K A K+D V+
Sbjct: 412 DSTFGHGAGTVPHRPLLVIEPSYKINGDDKKSRAARPAVDQDNKTATQTKVDTKTHNVAR 471
Query: 295 SNGDDNLAATSTSPPGVNSKDKSKS-ISGVPNQNMG------SDSSVEKTSKTMQPKKES 347
DD P ++ SK+ ++ P+ +G SDS+ E P K
Sbjct: 472 GTQDDTEGDNKVLTPNSDANGNSKTVVTPKPDPEVGENKPLKSDSNKENVEVPESPSKSK 531
Query: 348 AGDVRKGSAVPASKNLSQSAV-------PEISP--VTSHESGTASQ---------SKQDG 389
+ ++ ++ QS V P I V S + A + KQ G
Sbjct: 532 VTGLVVDNSAQKDVDVKQSKVQITKNIKPNIDSDNVVSSSTNNADKIGGFNTNMPMKQQG 591
Query: 390 EKS-SVTSSPVRSPLEENILLEVALEGSKRTLPIEEEMTSSPTPAESQEFAVQRNGSGPP 448
EK + + R+ LEENI+L VALEGSKRTLPI+EE+ + T E++E A + G+G P
Sbjct: 592 EKKPAAQAHASRTVLEENIVLGVALEGSKRTLPIDEEI-DNVTCREAKEMAALQGGNGSP 650
Query: 449 SNKDKKD 455
D D
Sbjct: 651 KASDGND 657
>Glyma04g10050.1
Length = 396
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 132/182 (72%), Gaps = 10/182 (5%)
Query: 1 MGLDFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSIM 60
M +DF GK LFM F REIFTNFLSSIM
Sbjct: 189 MRIDFTGKAVYTAIWIAAVSLFMSCWVFP----------HIISISLAGREIFTNFLSSIM 238
Query: 61 IHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNL 120
IHATRPF++NE IQTKI+GYEV+G VEHV WWSPTIVR D EAVHIPNH +VNVVRNL
Sbjct: 239 IHATRPFVVNERIQTKIKGYEVTGKVEHVSWWSPTIVRVSDCEAVHIPNHNLSVNVVRNL 298
Query: 121 SQKTHWRIKSYIAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQSL 180
S+K+HW IK+++AISHLDVNKIN I+A MRKVLAKNPQVEQ++LH RVFLEN++PENQ+L
Sbjct: 299 SKKSHWGIKTHLAISHLDVNKINSIIAYMRKVLAKNPQVEQKKLHIRVFLENIDPENQAL 358
Query: 181 MI 182
M+
Sbjct: 359 MV 360