Miyakogusa Predicted Gene

Lj1g3v1548780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1548780.1 Non Chatacterized Hit- tr|J3LAQ7|J3LAQ7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G1,48.65,0.000000000007,seg,NULL; TPR-like,NULL; TPR_11,NULL;
TPR_9,NULL; Tetratricopeptide repeats,Tetratricopeptide
repeat,CUFF.27502.1
         (224 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10220.1                                                       166   2e-41
Glyma04g10260.1                                                       157   9e-39
Glyma14g36130.1                                                       145   3e-35
Glyma01g29140.1                                                        89   2e-18
Glyma08g38180.1                                                        59   5e-09
Glyma12g21910.1                                                        51   8e-07

>Glyma06g10220.1 
          Length = 222

 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/224 (45%), Positives = 118/224 (52%), Gaps = 4/224 (1%)

Query: 1   MDMDERQVMMRDXXXXXXXXXXXXXXXXXXXXXPQRLFAKLRFQ--NRASVDAKRHFVKG 58
           M+ DE++ M+RD                     PQ L+AKLR +  N  +V AKRHFVKG
Sbjct: 1   MEFDEKKAMIRDVALQVVFISLTIFSFLWMHGIPQNLYAKLRHRPPNPRAVQAKRHFVKG 60

Query: 59  AQLLAQXXXXXXXXXXXXXXXXXXXXXXXXXXIALDPKDAAAYLLKAMVLDLQGFRTXXX 118
           AQLLAQ                          IALDPKDAA++LLK+M LDLQGFRT   
Sbjct: 61  AQLLAQARRSKSASSATSLAKQALAEAEKA--IALDPKDAASHLLKSMALDLQGFRTNAL 118

Query: 119 XXXXXXXXXXXXXXXXXGERGDALLKRGELKLATSQRGKVDPALADLTESVKLSPRNVKA 178
                             ERGDALLKR ELK+A S+R  VD  LADLTESVKLSPRN KA
Sbjct: 119 DALDAALSPLAAGSLAEDERGDALLKRAELKIAMSERRGVDSVLADLTESVKLSPRNAKA 178

Query: 179 WSLLGECYXXXXXXXXXXXXXXXXLQLEPELSAAQEALKRLSSA 222
           W +LGE Y                L+LEP+L+ AQEAL RL S+
Sbjct: 179 WCMLGETYEGNKMGEEAKKAYKEALELEPQLNVAQEALSRLGSS 222


>Glyma04g10260.1 
          Length = 221

 Score =  157 bits (397), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/224 (43%), Positives = 117/224 (52%), Gaps = 5/224 (2%)

Query: 1   MDMDERQVMMRDXXXXXXXXXXXXXXXXXXXXXPQRLFAKLRFQ--NRASVDAKRHFVKG 58
           M+ DE++ M+RD                     PQ L+AKLR +  N  +V AKRHFV+G
Sbjct: 1   MEADEKKAMIRDVALQVVFISLTIFSFLWMHGLPQNLYAKLRHRPPNSRAVQAKRHFVQG 60

Query: 59  AQLLAQXXXXXXXXXXXXXXXXXXXXXXXXXXIALDPKDAAAYLLKAMVLDLQGFRTXXX 118
           AQLLAQ                          +  DPKDAA++LLK+M LDLQGFRT   
Sbjct: 61  AQLLAQARRSKSASAATSLAKQALAEAEKALAL--DPKDAASHLLKSMALDLQGFRTNAL 118

Query: 119 XXXXXXXXXXXXXXXXXGERGDALLKRGELKLATSQRGKVDPALADLTESVKLSPRNVKA 178
                             ERGDALLKR ELK+A S+R +VD  LADLTESVKLSPRN KA
Sbjct: 119 DALDAALSPLAAGSLAEEERGDALLKRAELKIAMSER-RVDSVLADLTESVKLSPRNAKA 177

Query: 179 WSLLGECYXXXXXXXXXXXXXXXXLQLEPELSAAQEALKRLSSA 222
           W +LGECY                L+LEP+ + AQEAL RL S+
Sbjct: 178 WCMLGECYEGNKMGEEAKKAYKEALELEPQSNVAQEALSRLGSS 221


>Glyma14g36130.1 
          Length = 221

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 105/189 (55%), Gaps = 6/189 (3%)

Query: 34  PQRLFAKLRFQNRASVDAKRHFVKGAQLLAQXXXXXXXXXXXXXXXXXXXXXXXXXXIAL 93
           P++L+AKLR  NRA + AKRHFV+GAQLLA+                          IAL
Sbjct: 35  PKKLWAKLRLSNRADIQAKRHFVQGAQLLARARASKSKALAKEAQAQAQRA------IAL 88

Query: 94  DPKDAAAYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXXGERGDALLKRGELKLATS 153
           DP DAA +LLKA+ LD  G R+                     ERGDALLKR EL+L TS
Sbjct: 89  DPSDAAPHLLKALALDFLGLRSAALDSLDEALSPAAAKSLSDSERGDALLKRAELRLGTS 148

Query: 154 QRGKVDPALADLTESVKLSPRNVKAWSLLGECYXXXXXXXXXXXXXXXXLQLEPELSAAQ 213
           QRG+VD ALADLTESV+LSP N KA+  LG+CY                L+LEP+  AA+
Sbjct: 149 QRGRVDSALADLTESVRLSPNNAKAFFALGDCYERKKMNDDAIRAYGTALELEPQFHAAE 208

Query: 214 EALKRLSSA 222
           +AL RL S+
Sbjct: 209 QALNRLDSS 217


>Glyma01g29140.1 
          Length = 118

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 60/91 (65%), Gaps = 4/91 (4%)

Query: 91  IALDPKDAAAYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXXGERGDALLKRGELKL 150
           +ALDPK+AA++LLK+M LDLQGFR+                     ERG+ LLKR ELK+
Sbjct: 9   LALDPKEAASHLLKSMALDLQGFRSNVLDAALSPLAVGSLAEE---ERGNVLLKRAELKI 65

Query: 151 ATSQRGKVDPALADLTESVKLSPRNVKAWSL 181
           A S+R  VD  LADLTESVKLSPRN KAW +
Sbjct: 66  AMSERC-VDSMLADLTESVKLSPRNAKAWCI 95


>Glyma08g38180.1 
          Length = 213

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 91  IALDPKDAAAYLLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXXGERGDALLKRGELKL 150
           +A+ P+D  A++L+A  L L G R                      ER  AL++R ELK+
Sbjct: 80  LAVWPRDPRAHILRAQALHLTGQRAAAIKALDAALSSAAARSLSAAERVRALVERAELKV 139

Query: 151 ATSQRGKVDPALADLTESVKLSPRN--VKAWSLLGECYXXXXXXXXXXXXXXXXLQLEPE 208
           A +QR +VD A+ DL E+V LS  +    A  LLG+CY                L+++P+
Sbjct: 140 AMNQRRRVDSAVKDLVEAVGLSGGSDLEDALCLLGKCYEWKGMKEEAKDAFQKVLEVQPD 199

Query: 209 LSAAQEALKRL 219
              A+  L+RL
Sbjct: 200 SEEARSGLERL 210


>Glyma12g21910.1 
          Length = 114

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 42  RFQNRASVDAKRHFVKGAQLLAQXXXXXXXXXXXXXXXXXXXXXXXXXXIALDPKDAAAY 101
           R  N   V AKRHFV+GAQLLAQ                          +ALDPKDA ++
Sbjct: 3   RPPNPRVVQAKRHFVQGAQLLAQ--ARRSKSASAATSLAKQALAEVEKALALDPKDATSH 60

Query: 102 LLKAMVLDLQGFRTXXXXXXXXXXXXXXXXXXXXGERGDALLKRGELKLATSQR 155
                   LQGF T                     E+GDALLKR  LK+  S R
Sbjct: 61  --------LQGFSTNALDALDAALSPLAAGSLAEEEKGDALLKRAGLKIGMSGR 106