Miyakogusa Predicted Gene

Lj1g3v1526320.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1526320.2 Non Chatacterized Hit- tr|I1NVC7|I1NVC7_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,43,4e-18,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.27480.2
         (304 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10350.1                                                       304   7e-83
Glyma14g03990.1                                                       204   8e-53
Glyma07g36010.1                                                       202   4e-52
Glyma04g10480.1                                                       123   3e-28
Glyma04g10430.1                                                       103   2e-22
Glyma02g44740.1                                                        52   6e-07

>Glyma06g10350.1 
          Length = 408

 Score =  304 bits (779), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 154/194 (79%), Positives = 174/194 (89%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVPM +YPFFLAQ  TFGYV +YFSILY RYR  IVT+EMLAIPK RF+ IG
Sbjct: 86  NRVLYKLALVPMKEYPFFLAQFITFGYVVIYFSILYFRYRARIVTDEMLAIPKLRFVAIG 145

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
           FLEALG+ SGMSAA +LPGPVIPILNQT+LVWQLMFSTLLLRRRYSINQ+ GCLLVA GV
Sbjct: 146 FLEALGLVSGMSAAAVLPGPVIPILNQTFLVWQLMFSTLLLRRRYSINQLVGCLLVAVGV 205

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           V+A+TSGSNTGQMLS+V+FFWPALMI+S +FQA AS++KE +FIDS T+LKHKSLDIFVV
Sbjct: 206 VVAITSGSNTGQMLSEVQFFWPALMIISCSFQAWASVMKESIFIDSATQLKHKSLDIFVV 265

Query: 287 NSFGSGFQVWLVMV 300
           NSFGSGFQ   V++
Sbjct: 266 NSFGSGFQALFVLL 279


>Glyma14g03990.1 
          Length = 401

 Score =  204 bits (520), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 109/196 (55%), Positives = 141/196 (71%), Gaps = 1/196 (0%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQL TFGYV VYF+ILYIR+  GIVT+EML  PK  F+++G
Sbjct: 73  NRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHHAGIVTDEMLDAPKAPFIVVG 132

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEAL  A+GM+A  +L G  IPIL+QT+LVWQ++ S + L RRY +NQ+ GC LV  GV
Sbjct: 133 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNQLLGCFLVTIGV 192

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHK-SLDIFV 285
           V+ V SG+  G +L +   FW  LMIVS   QA  +++KE +F+DS  +LK    +D+FV
Sbjct: 193 VVTVASGAGAGNLLKEGGMFWSLLMIVSFFLQAADTVLKEIIFLDSSRKLKGGCCMDLFV 252

Query: 286 VNSFGSGFQVWLVMVM 301
           VNS+GS FQ   V ++
Sbjct: 253 VNSYGSAFQALFVCLL 268


>Glyma07g36010.1 
          Length = 388

 Score =  202 bits (514), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 109/195 (55%), Positives = 137/195 (70%), Gaps = 11/195 (5%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+ +YPFFLAQL TFGYV VYFSILYIRYR GIVT+EML++PK  FL++G
Sbjct: 76  NRVLYKLALVPLRNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDEMLSVPKTPFLVVG 135

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEALG A+GM+A               +LVWQ++ S   L RRY +NQ+ GC LVA GV
Sbjct: 136 LLEALGAATGMAAGGN-----------AFLVWQILLSYFFLGRRYKVNQLVGCSLVAIGV 184

Query: 227 VMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           ++ V SGS  G  L +   FW  LMIVS  FQA  +++KE +F+D+  +LK  SLD+FVV
Sbjct: 185 ILTVVSGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATQKLKGGSLDMFVV 244

Query: 287 NSFGSGFQVWLVMVM 301
           NSFGS FQ   + ++
Sbjct: 245 NSFGSAFQALFICLL 259


>Glyma04g10480.1 
          Length = 214

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 64/74 (86%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVPM +YPFFLAQ  TFGYV +YFSILY RYR  IVT+EMLAIPK RF+ IG
Sbjct: 84  NRVLYKLALVPMKEYPFFLAQFITFGYVVIYFSILYFRYRARIVTDEMLAIPKLRFVAIG 143

Query: 167 FLEALGVASGMSAA 180
           FLEALG+ SGMSAA
Sbjct: 144 FLEALGLVSGMSAA 157


>Glyma04g10430.1 
          Length = 191

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 56/62 (90%)

Query: 239 MLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVVNSFGSGFQVWLV 298
           MLS+V+FFWPALMI+S +FQA AS+IKE++FIDS TRLKHKSLDIFVVNSFGSGFQ   V
Sbjct: 1   MLSEVQFFWPALMIISCSFQALASVIKEYIFIDSATRLKHKSLDIFVVNSFGSGFQALFV 60

Query: 299 MV 300
           ++
Sbjct: 61  LL 62


>Glyma02g44740.1 
          Length = 228

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Query: 246 FWPALMIVSAAFQAGASIIKEFVFIDSITRLKHK-SLDIFVVNSFGSGFQV 295
           FW  LMIVS   QA  +++ E +F+DS  +LK    +D+FVVNS+GS FQV
Sbjct: 56  FWSLLMIVSFFLQAAETVLMEIIFLDSSRKLKGGCCMDLFVVNSYGSAFQV 106