Miyakogusa Predicted Gene

Lj1g3v1526270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1526270.1 tr|A9SK71|A9SK71_PHYPA Qc-SNARE, plant
SFT1-family OS=Physcomitrella patens subsp. patens GN=SFT1
PE,42.16,3e-17,no description,NULL; T_SNARE,Target SNARE coiled-coil
domain; SUBFAMILY NOT NAMED,NULL; GOLGI SNARE ,CUFF.27468.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10370.2                                                       216   4e-57
Glyma14g35710.1                                                       205   1e-53
Glyma02g37440.1                                                       201   2e-52
Glyma06g10370.1                                                       187   3e-48
Glyma04g10510.2                                                       124   2e-29
Glyma04g10510.1                                                       100   6e-22

>Glyma06g10370.2 
          Length = 133

 Score =  216 bits (551), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/133 (78%), Positives = 118/133 (88%)

Query: 1   MSFNSHRGPSSYGDAAPFRSREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLR 60
           MS +SH+G S YGDAAP+RSREGLSTR  A+SDEIQL IDP  D DDEITGLRGQV+KL+
Sbjct: 1   MSSHSHKGTSFYGDAAPYRSREGLSTRPVASSDEIQLHIDPGIDFDDEITGLRGQVKKLK 60

Query: 61  NVAEEIGTEVKSHRDFLEVMQMTMIKAQAGVKNNLRRLNKSIVQNGSNHIVHVVVFALIC 120
           NVAEEIG+EVK  RDFLE +QM MI+AQAGVKNNLRRLNKSIV+NGSN+IVHV+ FAL+C
Sbjct: 61  NVAEEIGSEVKFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVC 120

Query: 121 FSIVYFWSKISRK 133
           F IVYFWSK+SRK
Sbjct: 121 FFIVYFWSKMSRK 133


>Glyma14g35710.1 
          Length = 132

 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 116/133 (87%), Gaps = 1/133 (0%)

Query: 1   MSFNSHRGPSSYGDAAPFRSREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLR 60
           M+ NSHR  SSYG AAP+RSR+GLSTR   AS+EIQLRIDP+ D+DDEITGL  QVR+L+
Sbjct: 1   MAANSHRLGSSYGGAAPYRSRDGLSTRPVGASEEIQLRIDPL-DLDDEITGLHRQVRRLK 59

Query: 61  NVAEEIGTEVKSHRDFLEVMQMTMIKAQAGVKNNLRRLNKSIVQNGSNHIVHVVVFALIC 120
           +VAEEIGTEVK  + FLE +QMTMIKAQAGVKNNLRRLNKSIVQ+GSNHI+HV++FAL+C
Sbjct: 60  HVAEEIGTEVKYQKTFLEELQMTMIKAQAGVKNNLRRLNKSIVQSGSNHIIHVIIFALVC 119

Query: 121 FSIVYFWSKISRK 133
           F +VY WSK+ RK
Sbjct: 120 FFVVYLWSKMFRK 132


>Glyma02g37440.1 
          Length = 132

 Score =  201 bits (510), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 115/133 (86%), Gaps = 1/133 (0%)

Query: 1   MSFNSHRGPSSYGDAAPFRSREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLR 60
           M  NSHR  SSYG AAP+RSR+GLS R   AS+EIQLRIDP+ D+DDEITGL  QVR+L+
Sbjct: 1   MVANSHRVGSSYGGAAPYRSRDGLSPRPVGASEEIQLRIDPL-DLDDEITGLHRQVRRLK 59

Query: 61  NVAEEIGTEVKSHRDFLEVMQMTMIKAQAGVKNNLRRLNKSIVQNGSNHIVHVVVFALIC 120
           +VAEEIGTEVK  ++FLE +QMTMIKAQAGVKNNLRRLNKSI+Q+GSNHI+HV++FAL+C
Sbjct: 60  HVAEEIGTEVKYQKNFLEELQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIIHVILFALVC 119

Query: 121 FSIVYFWSKISRK 133
           F +VY WSK+ RK
Sbjct: 120 FFVVYLWSKMIRK 132


>Glyma06g10370.1 
          Length = 142

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 101/114 (88%)

Query: 20  SREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLRNVAEEIGTEVKSHRDFLEV 79
            REGLSTR  A+SDEIQL IDP  D DDEITGLRGQV+KL+NVAEEIG+EVK  RDFLE 
Sbjct: 29  CREGLSTRPVASSDEIQLHIDPGIDFDDEITGLRGQVKKLKNVAEEIGSEVKFQRDFLEQ 88

Query: 80  MQMTMIKAQAGVKNNLRRLNKSIVQNGSNHIVHVVVFALICFSIVYFWSKISRK 133
           +QM MI+AQAGVKNNLRRLNKSIV+NGSN+IVHV+ FAL+CF IVYFWSK+SRK
Sbjct: 89  VQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVCFFIVYFWSKMSRK 142


>Glyma04g10510.2 
          Length = 80

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/78 (79%), Positives = 67/78 (85%)

Query: 1  MSFNSHRGPSSYGDAAPFRSREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLR 60
          MS NSHRG S YG+AAP+RSREGLSTR  A+SDEIQL IDP  D DDEITGLRGQVRKL+
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDPGVDFDDEITGLRGQVRKLK 60

Query: 61 NVAEEIGTEVKSHRDFLE 78
          NVAEEIG+EVK  RDFLE
Sbjct: 61 NVAEEIGSEVKFQRDFLE 78


>Glyma04g10510.1 
          Length = 84

 Score =  100 bits (248), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 53/62 (85%)

Query: 1  MSFNSHRGPSSYGDAAPFRSREGLSTRAGAASDEIQLRIDPVGDMDDEITGLRGQVRKLR 60
          MS NSHRG S YG+AAP+RSREGLSTR  A+SDEIQL IDP  D DDEITGLRGQVRKL+
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDPGVDFDDEITGLRGQVRKLK 60

Query: 61 NV 62
          NV
Sbjct: 61 NV 62