Miyakogusa Predicted Gene

Lj1g3v1515820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1515820.1 tr|E0CRP9|E0CRP9_VITVI Queuine
tRNA-ribosyltransferase OS=Vitis vinifera GN=VIT_18s0001g06460 PE=3
S,82.01,0,tgt_general: tRNA-guanine transglycosylases,
vario,Queuine/other tRNA-ribosyltransferase; SUBFAMILY
,gene.g31528.t1.1
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10550.1                                                       259   2e-69
Glyma04g10710.1                                                       166   2e-41
Glyma06g10560.1                                                        95   1e-19

>Glyma06g10550.1 
          Length = 361

 Score =  259 bits (663), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 120/124 (96%), Positives = 123/124 (99%)

Query: 1   MLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIEAHKRPHDQ 60
           MLLTPEESIQIQNRIGADIIMALDDVVKTTITGPR+EEAMYRTLRWIDRCI AHKRPHDQ
Sbjct: 219 MLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQ 278

Query: 61  NLFGIVQGGLDPVLRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTASLPEDKP 120
           NLFGIVQGGLDP+LRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTA+LPEDKP
Sbjct: 279 NLFGIVQGGLDPILRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKP 338

Query: 121 RYVM 124
           RYVM
Sbjct: 339 RYVM 342


>Glyma04g10710.1 
          Length = 112

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 85/101 (84%), Gaps = 8/101 (7%)

Query: 142 MYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPTCSCMVCKTYTRAYLHCLVTK 201
           MYDCVYPTRTARFGTALVPEGVLKLKH+AMADDTRPIDPTC CMVCK Y+RAY+HCLVTK
Sbjct: 1   MYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMVCKNYSRAYIHCLVTK 60

Query: 202 DAMGSQLVSYHNLYYMMQFRK--------GDVPEWVCDAME 234
           DAMGSQL+SYHNLYYM+Q  +        G  PE+VCD + 
Sbjct: 61  DAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLH 101


>Glyma06g10560.1 
          Length = 78

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 58/93 (62%), Gaps = 26/93 (27%)

Query: 142 MYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPTCSCMVCKTYTRAYLHCLVTK 201
           MYDCVYPTRTARFGTALVPEGVLKLKH+AMADDTRPIDPTC CM+ +             
Sbjct: 1   MYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMLSRN------------ 48

Query: 202 DAMGSQLVSYHNLYYMMQFRKGDVPEWVCDAME 234
             + S +V            +G  PE+VCD + 
Sbjct: 49  --LHSSIV------------EGRFPEFVCDFLR 67