Miyakogusa Predicted Gene

Lj1g3v1514800.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1514800.2 tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase
OS=Medicago truncatula GN=MTR_3g099470 PE=4
SV=1,84.66,0,TRNASYNTHSER,Serine-tRNA ligase, type1;
tRNA-synt_2b,Aminoacyl-tRNA synthetase, class II (G/ H/ P/
S,CUFF.27429.2
         (513 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g10750.1                                                       807   0.0  
Glyma04g10750.3                                                       664   0.0  
Glyma04g10750.2                                                       610   e-174
Glyma06g10620.1                                                       291   2e-78
Glyma10g29600.1                                                       238   2e-62
Glyma20g37700.1                                                       236   3e-62

>Glyma04g10750.1 
          Length = 506

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/514 (77%), Positives = 422/514 (82%), Gaps = 11/514 (2%)

Query: 1   MGLHGCLNITTLQSFKLGAFRTYPSSHQRTKAPFLYSQKPSLPRPIKALXXXXXXXXXXX 60
           MGLHGC       + KL +   + S     K P L  QK  L RPI+AL           
Sbjct: 2   MGLHGC-------TLKLASVPNFSSPTFLFKTPTLRFQKSPLSRPIRALSSSALVQTSTT 54

Query: 61  XXXXXXXXKGGKPQWKATIDFKWIKDNKEAVAANIRNRNSHANLDLVLHLYDSMFHLQKE 120
                   +G KPQWKATIDFKWIKDNKEAVAAN++NRNS A+L+LVLHLYD MF LQKE
Sbjct: 55  KATED---QGVKPQWKATIDFKWIKDNKEAVAANLKNRNSDADLNLVLHLYDKMFTLQKE 111

Query: 121 VERVRGERNAVANKMKGKIEPSERQRLIEEGKKLKEGLIAXXXXXXXXXXXXQQEAQSIP 180
           VERVRGERNAVANKMKGK+E SERQRLIEEGK LKEGL A            QQEAQ IP
Sbjct: 112 VERVRGERNAVANKMKGKLEQSERQRLIEEGKNLKEGLAALEEDLAKLNDELQQEAQCIP 171

Query: 181 NITHPDVPIGGEDCSTIIKMVGSAPKFSFPVKDHLQLGKXXXXXXXXXXXEVSGSKFYYL 240
           N+THPDVPIGGEDCSTI KMVGS+PKFSFPVKDHLQLGK           EVSGSKFYYL
Sbjct: 172 NMTHPDVPIGGEDCSTIRKMVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYL 231

Query: 241 KNEAVLLEMALLNWTLSEVMKRGFTPITTPEIVRSSVVEKCGFQPRADNTQIYSIEDSDQ 300
           KNEAVLLEMAL+NWTLSEVMKRGFTP+TTPE+VRSSVVEKCGFQPRA+NTQIYSI DSDQ
Sbjct: 232 KNEAVLLEMALVNWTLSEVMKRGFTPLTTPELVRSSVVEKCGFQPRANNTQIYSIADSDQ 291

Query: 301 CLIGTAEIPVGGLHMDSILADSLLPLKYVAFSHCFRTEXXXXXXXTRGLYRVHQFSKVEM 360
           CLIGTAEIPVGGLHMDSIL+DSLLPLKYVAFSHCFRTE       TRGLYRVHQFSKVEM
Sbjct: 292 CLIGTAEIPVGGLHMDSILSDSLLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEM 351

Query: 361 FVFCRPEESEYYHQELIKIEEDIFSSLGLHFKILDMASEDLGAPAYRKSDVEAWMPGLER 420
           F+FCRPEESE+YHQELI IEED+FSSLGLHFK LDMASEDLGAPAY+K DVEAWMPGLER
Sbjct: 352 FIFCRPEESEHYHQELITIEEDLFSSLGLHFKTLDMASEDLGAPAYQKFDVEAWMPGLER 411

Query: 421 FGEISSASNCTDYQSRRLGIRYRP-SEALAPGPKKSKGNLAPPQFVHTLNATACAVPRMI 479
           FGEISSASNCTDYQSRRLGIRYRP SEA A   KKSKGNLAPPQFVHTLNATACAVPRMI
Sbjct: 412 FGEISSASNCTDYQSRRLGIRYRPASEAQATSAKKSKGNLAPPQFVHTLNATACAVPRMI 471

Query: 480 ICLLENYQQEDGSVLIPEPLRPFMGGLNIIARKS 513
           ICLLENYQQEDGSVLIPEPLRPFMGGL++IARKS
Sbjct: 472 ICLLENYQQEDGSVLIPEPLRPFMGGLSVIARKS 505


>Glyma04g10750.3 
          Length = 381

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/380 (84%), Positives = 336/380 (88%), Gaps = 1/380 (0%)

Query: 135 MKGKIEPSERQRLIEEGKKLKEGLIAXXXXXXXXXXXXQQEAQSIPNITHPDVPIGGEDC 194
           MKGK+E SERQRLIEEGK LKEGL A            QQEAQ IPN+THPDVPIGGEDC
Sbjct: 1   MKGKLEQSERQRLIEEGKNLKEGLAALEEDLAKLNDELQQEAQCIPNMTHPDVPIGGEDC 60

Query: 195 STIIKMVGSAPKFSFPVKDHLQLGKXXXXXXXXXXXEVSGSKFYYLKNEAVLLEMALLNW 254
           STI KMVGS+PKFSFPVKDHLQLGK           EVSGSKFYYLKNEAVLLEMAL+NW
Sbjct: 61  STIRKMVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 120

Query: 255 TLSEVMKRGFTPITTPEIVRSSVVEKCGFQPRADNTQIYSIEDSDQCLIGTAEIPVGGLH 314
           TLSEVMKRGFTP+TTPE+VRSSVVEKCGFQPRA+NTQIYSI DSDQCLIGTAEIPVGGLH
Sbjct: 121 TLSEVMKRGFTPLTTPELVRSSVVEKCGFQPRANNTQIYSIADSDQCLIGTAEIPVGGLH 180

Query: 315 MDSILADSLLPLKYVAFSHCFRTEXXXXXXXTRGLYRVHQFSKVEMFVFCRPEESEYYHQ 374
           MDSIL+DSLLPLKYVAFSHCFRTE       TRGLYRVHQFSKVEMF+FCRPEESE+YHQ
Sbjct: 181 MDSILSDSLLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFIFCRPEESEHYHQ 240

Query: 375 ELIKIEEDIFSSLGLHFKILDMASEDLGAPAYRKSDVEAWMPGLERFGEISSASNCTDYQ 434
           ELI IEED+FSSLGLHFK LDMASEDLGAPAY+K DVEAWMPGLERFGEISSASNCTDYQ
Sbjct: 241 ELITIEEDLFSSLGLHFKTLDMASEDLGAPAYQKFDVEAWMPGLERFGEISSASNCTDYQ 300

Query: 435 SRRLGIRYRP-SEALAPGPKKSKGNLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSV 493
           SRRLGIRYRP SEA A   KKSKGNLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSV
Sbjct: 301 SRRLGIRYRPASEAQATSAKKSKGNLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSV 360

Query: 494 LIPEPLRPFMGGLNIIARKS 513
           LIPEPLRPFMGGL++IARKS
Sbjct: 361 LIPEPLRPFMGGLSVIARKS 380


>Glyma04g10750.2 
          Length = 334

 Score =  610 bits (1572), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 292/333 (87%), Positives = 305/333 (91%), Gaps = 1/333 (0%)

Query: 182 ITHPDVPIGGEDCSTIIKMVGSAPKFSFPVKDHLQLGKXXXXXXXXXXXEVSGSKFYYLK 241
           +THPDVPIGGEDCSTI KMVGS+PKFSFPVKDHLQLGK           EVSGSKFYYLK
Sbjct: 1   MTHPDVPIGGEDCSTIRKMVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLK 60

Query: 242 NEAVLLEMALLNWTLSEVMKRGFTPITTPEIVRSSVVEKCGFQPRADNTQIYSIEDSDQC 301
           NEAVLLEMAL+NWTLSEVMKRGFTP+TTPE+VRSSVVEKCGFQPRA+NTQIYSI DSDQC
Sbjct: 61  NEAVLLEMALVNWTLSEVMKRGFTPLTTPELVRSSVVEKCGFQPRANNTQIYSIADSDQC 120

Query: 302 LIGTAEIPVGGLHMDSILADSLLPLKYVAFSHCFRTEXXXXXXXTRGLYRVHQFSKVEMF 361
           LIGTAEIPVGGLHMDSIL+DSLLPLKYVAFSHCFRTE       TRGLYRVHQFSKVEMF
Sbjct: 121 LIGTAEIPVGGLHMDSILSDSLLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMF 180

Query: 362 VFCRPEESEYYHQELIKIEEDIFSSLGLHFKILDMASEDLGAPAYRKSDVEAWMPGLERF 421
           +FCRPEESE+YHQELI IEED+FSSLGLHFK LDMASEDLGAPAY+K DVEAWMPGLERF
Sbjct: 181 IFCRPEESEHYHQELITIEEDLFSSLGLHFKTLDMASEDLGAPAYQKFDVEAWMPGLERF 240

Query: 422 GEISSASNCTDYQSRRLGIRYRP-SEALAPGPKKSKGNLAPPQFVHTLNATACAVPRMII 480
           GEISSASNCTDYQSRRLGIRYRP SEA A   KKSKGNLAPPQFVHTLNATACAVPRMII
Sbjct: 241 GEISSASNCTDYQSRRLGIRYRPASEAQATSAKKSKGNLAPPQFVHTLNATACAVPRMII 300

Query: 481 CLLENYQQEDGSVLIPEPLRPFMGGLNIIARKS 513
           CLLENYQQEDGSVLIPEPLRPFMGGL++IARKS
Sbjct: 301 CLLENYQQEDGSVLIPEPLRPFMGGLSVIARKS 333


>Glyma06g10620.1 
          Length = 185

 Score =  291 bits (744), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/167 (85%), Positives = 149/167 (89%), Gaps = 9/167 (5%)

Query: 348 GLYRVHQFSKVEMFVFCRPEESEYYHQELIKIEEDIFSSLGLHFKILDMASEDLGAPAYR 407
           GLYRVHQFSKVEMF+FCRPEESE+YHQELIKIEED+FSSLGLHFK        LGA AY 
Sbjct: 26  GLYRVHQFSKVEMFIFCRPEESEHYHQELIKIEEDLFSSLGLHFK--------LGAAAYH 77

Query: 408 KSDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRP-SEALAPGPKKSKGNLAPPQFVH 466
           K DVEAWMPGLERFGEISSASNCTDYQSRRLGIRY P SEA A   KKSKGNLAPPQFVH
Sbjct: 78  KFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYCPASEAQATSAKKSKGNLAPPQFVH 137

Query: 467 TLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFMGGLNIIARKS 513
           TLNATACAVPRMIICLLEN+QQEDGSVLIPEPLRPFMGGL++IA KS
Sbjct: 138 TLNATACAVPRMIICLLENHQQEDGSVLIPEPLRPFMGGLSVIAIKS 184


>Glyma10g29600.1 
          Length = 447

 Score =  238 bits (606), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/416 (33%), Positives = 222/416 (53%), Gaps = 19/416 (4%)

Query: 104 LDLVLHLYDSMFHLQKEVERVRGERNAVANKMKGKIEPS--ERQRLIEEGKKLKEGLIAX 161
           +D V++L       Q E+E +R E N + NK   K++ +  +  + I E ++ K+ +   
Sbjct: 32  VDEVINLDKEWRKRQFELENLRKEFNKI-NKEVSKLKRAGEDASKFITESEETKKSIAEK 90

Query: 162 XXXXXXXXXXXQQEAQSIPNITHPDVPIGGEDCSTIIKMVGSAPKFSFPVKDHLQLGKXX 221
                        + ++I N+ H  VPI  ++ + ++       +    +K+H+ L +  
Sbjct: 91  EVEVRETLNLLNSKLETIGNLVHDSVPISNDEANNVVVRSWGEKRVEPKLKNHVDLVELL 150

Query: 222 XXXXXXXXXEVSGSKFYYLKNEAVLLEMALLNWTLSEVMKRGFTPITTPEIVRSSVVEKC 281
                    +V+G + +YLK + V L  AL+N+ L  + KR +T + TP  +R  ++ KC
Sbjct: 151 GIADTKKGADVAGGRGFYLKGDGVRLNQALINFGLDFLDKREYTLLHTPFFMRKDIMSKC 210

Query: 282 GFQPRADNTQIYSI--EDSDQCLIGTAEIPVGGLHMDSILADSLLPLKYVAFSHCFRTEX 339
               + D  ++Y +  E  D+ LI TAE P+   H+D  +  + LP++Y  +S CFR E 
Sbjct: 211 AQLAQFDE-ELYKVTGEGDDKYLIATAEQPLCAYHLDDWIHPTQLPIRYAGYSSCFRKEA 269

Query: 340 XXXXXXTRGLYRVHQFSKVEMFVFCRPEESEYY--HQELIKIEEDIFSSLGLHFKILDMA 397
                 T G++RVHQF KVE F    P +++ +  H+E++K  ED + +L L ++++ + 
Sbjct: 270 GSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIV 329

Query: 398 SEDLGAPAYRKSDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEALAPGPKKSKG 457
           S  L   A +K D+EAW P  + + E+ S SNCTDYQ+RRL IRY        G KKS  
Sbjct: 330 SGALNDAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRY--------GQKKS-- 379

Query: 458 NLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFMGGLNIIARKS 513
           N    Q+VH LN+T  A  R I C+LEN Q+EDG V IPE LRPFMGG   +  KS
Sbjct: 380 NEQMKQYVHLLNSTLTATERTICCILENNQKEDG-VEIPEVLRPFMGGKTFLPFKS 434


>Glyma20g37700.1 
          Length = 447

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/408 (34%), Positives = 219/408 (53%), Gaps = 19/408 (4%)

Query: 104 LDLVLHLYDSMFHLQKEVERVRGERNAVANKMKGKIEPS--ERQRLIEEGKKLKEGLIAX 161
           +D V++L       Q E+E +R E N + NK   K++ +  +  + I E ++ K+ +   
Sbjct: 32  VDEVINLDKEWRKRQFELENLRKEFNKI-NKEVSKLKRAGEDATKFISESEETKKSIGEK 90

Query: 162 XXXXXXXXXXXQQEAQSIPNITHPDVPIGGEDCSTIIKMVGSAPKFSFPVKDHLQLGKXX 221
                        + ++I N+ H  VPI  ++ + ++       +    +K+H+ L +  
Sbjct: 91  EVEVRETLNLLNSKLETIGNLVHDSVPISQDEANNVVVRSWGEKRVEPKLKNHVDLVELL 150

Query: 222 XXXXXXXXXEVSGSKFYYLKNEAVLLEMALLNWTLSEVMKRGFTPITTPEIVRSSVVEKC 281
                    +V+G + +YLK + V L  AL+N+ L  + KR +T + TP  +R  ++ KC
Sbjct: 151 GIADTKKGADVAGGRGFYLKGDGVRLNQALINFGLDFLEKREYTLLHTPFFMRKDIMSKC 210

Query: 282 GFQPRADNTQIYSI--EDSDQCLIGTAEIPVGGLHMDSILADSLLPLKYVAFSHCFRTEX 339
               + D  ++Y +  E  D+ LI TAE P+   H+D  +  + LPL+Y  +S CFR E 
Sbjct: 211 AQLAQFDE-ELYKVTGEGDDKYLIATAEQPLCAYHLDDWIHPTQLPLRYAGYSSCFRKEA 269

Query: 340 XXXXXXTRGLYRVHQFSKVEMFVFCRPEESEYY--HQELIKIEEDIFSSLGLHFKILDMA 397
                 T G++RVHQF KVE F    P +++ +  H+E++K  ED + +L L ++++ + 
Sbjct: 270 GSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIV 329

Query: 398 SEDLGAPAYRKSDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEALAPGPKKSKG 457
           S  L   A +K D+EAW P  + + E+ S SNCTDYQ+RRL IRY        G KKS  
Sbjct: 330 SGALNDAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRY--------GQKKS-- 379

Query: 458 NLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFMGG 505
           N    Q+VH LN+T  A  R I C+LEN Q+EDG V IPE LRPFMGG
Sbjct: 380 NEQMKQYVHLLNSTLTATERTICCILENNQKEDG-VEIPEALRPFMGG 426