Miyakogusa Predicted Gene

Lj1g3v1501530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1501530.1 Non Chatacterized Hit- tr|I1GU71|I1GU71_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50.98,4e-18,coiled-coil,NULL; seg,NULL,CUFF.27417.1
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g37330.1                                                       213   9e-56
Glyma06g17750.2                                                       208   2e-54
Glyma06g17750.1                                                       208   2e-54

>Glyma04g37330.1 
          Length = 221

 Score =  213 bits (541), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 112/167 (67%), Positives = 127/167 (76%), Gaps = 6/167 (3%)

Query: 1   MSLIGPLPPLAS----NTIPKLKTINPSI--GTKFXXXXXXXXXXXXXXXXXPSSAIPSL 54
           MSL+  LPPLA+    NT+PKLKT +P++  G +                  PS AIPSL
Sbjct: 1   MSLMSLLPPLAAASYTNTVPKLKTHSPNLVLGQRVLPNLLSLALAVTLASPLPSYAIPSL 60

Query: 55  NSQPPSTSLTTPFSQAKNLKVGLENGKIRTCPSINPGCISSNPKSSSFAFPWLIPENSLD 114
           NSQ P  S TTPFSQ+KNL++GLENGKIR CPSINPGCIS+NPKSSSFAFPWLIP NSLD
Sbjct: 61  NSQSPPISFTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFAFPWLIPSNSLD 120

Query: 115 NPIQKLREAILKTQKNVKFLLVEDTPDGQYMQAEVDAGFDRDVLEFL 161
           + IQKLREAILKTQKNVKF  VED+PDGQY+QAEVD GF RDV+EFL
Sbjct: 121 DAIQKLREAILKTQKNVKFQPVEDSPDGQYLQAEVDGGFGRDVIEFL 167


>Glyma06g17750.2 
          Length = 212

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 125/169 (73%), Gaps = 8/169 (4%)

Query: 1   MSLIGPL-PPLAS----NTIPKLKTI---NPSIGTKFXXXXXXXXXXXXXXXXXPSSAIP 52
           MSL+  L PPLAS    NT PKLKT    N  +G +                  PS AIP
Sbjct: 1   MSLMSSLLPPLASSSYINTAPKLKTTHTPNLVLGQRVLPNLLSLALAVTLASPLPSHAIP 60

Query: 53  SLNSQPPSTSLTTPFSQAKNLKVGLENGKIRTCPSINPGCISSNPKSSSFAFPWLIPENS 112
           SLNSQPP  SLTTPFSQ+KNL++GLENGKIR CPSINPGCIS+NPKSSSF+FPWLIP NS
Sbjct: 61  SLNSQPPPISLTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSFPWLIPSNS 120

Query: 113 LDNPIQKLREAILKTQKNVKFLLVEDTPDGQYMQAEVDAGFDRDVLEFL 161
            D+ IQKLREAILKTQKNVKF  VEDTPDGQY+QAEVD GF RD+LEFL
Sbjct: 121 SDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFL 169


>Glyma06g17750.1 
          Length = 223

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 125/169 (73%), Gaps = 8/169 (4%)

Query: 1   MSLIGPL-PPLAS----NTIPKLKTI---NPSIGTKFXXXXXXXXXXXXXXXXXPSSAIP 52
           MSL+  L PPLAS    NT PKLKT    N  +G +                  PS AIP
Sbjct: 1   MSLMSSLLPPLASSSYINTAPKLKTTHTPNLVLGQRVLPNLLSLALAVTLASPLPSHAIP 60

Query: 53  SLNSQPPSTSLTTPFSQAKNLKVGLENGKIRTCPSINPGCISSNPKSSSFAFPWLIPENS 112
           SLNSQPP  SLTTPFSQ+KNL++GLENGKIR CPSINPGCIS+NPKSSSF+FPWLIP NS
Sbjct: 61  SLNSQPPPISLTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSFPWLIPSNS 120

Query: 113 LDNPIQKLREAILKTQKNVKFLLVEDTPDGQYMQAEVDAGFDRDVLEFL 161
            D+ IQKLREAILKTQKNVKF  VEDTPDGQY+QAEVD GF RD+LEFL
Sbjct: 121 SDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFL 169