Miyakogusa Predicted Gene
- Lj1g3v1465190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1465190.1 tr|Q2HTD6|Q2HTD6_MEDTR RNA-binding region RNP-1
(RNA recognition motif); Calcium-binding EF-hand OS=,52.17,0.0000004,
,CUFF.27349.1
(67 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g37890.1 53 8e-08
Glyma06g47820.2 52 2e-07
Glyma13g19840.1 51 2e-07
Glyma13g12120.1 51 3e-07
Glyma15g41310.1 51 3e-07
Glyma06g21930.1 50 5e-07
Glyma20g27760.1 50 7e-07
Glyma0146s00220.1 50 7e-07
Glyma15g34200.1 49 8e-07
Glyma01g21220.1 49 8e-07
Glyma15g21390.1 49 9e-07
Glyma03g29350.2 49 1e-06
Glyma06g00210.1 49 1e-06
Glyma12g20980.1 48 3e-06
Glyma11g30070.1 47 4e-06
Glyma08g22780.1 47 4e-06
Glyma03g09160.1 47 5e-06
Glyma07g33290.1 46 8e-06
>Glyma10g37890.1
Length = 479
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 112 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 157
>Glyma06g47820.2
Length = 1402
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 826 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 871
>Glyma13g19840.1
Length = 1471
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 1078 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 1123
>Glyma13g12120.1
Length = 1073
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMV+
Sbjct: 359 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVK 404
>Glyma15g41310.1
Length = 782
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 GQQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVERVALDDLRKCVAK 61
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE L L +++
Sbjct: 538 SQHENKVGVAEMRMLRWVCGKTRQDKIRNEAIRERVGVAPIVEKMVEN-RLRSLEAAMSR 596
Query: 62 VNHLV 66
V+ +V
Sbjct: 597 VDSMV 601
>Glyma06g21930.1
Length = 254
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 2 GQQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 116 SQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGIAPIVEKMVE 162
>Glyma20g27760.1
Length = 1321
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 1202 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 1247
>Glyma0146s00220.1
Length = 885
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 766 QHENKVGVAEMRMLRWMCGKTRQDKIRNETIRERVGVAPIVEKMVE 811
>Glyma15g34200.1
Length = 1627
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 1508 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 1553
>Glyma01g21220.1
Length = 313
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 194 QHEKKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 239
>Glyma15g21390.1
Length = 1523
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 2 GQQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N RE+ ++PIVEKMVE
Sbjct: 1403 SQHENKVGVAEMRMLRWMCGKTRQDKIRNGAIRERVGVSPIVEKMVE 1449
>Glyma03g29350.2
Length = 1588
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 918 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 963
>Glyma06g00210.1
Length = 197
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E ++ V EM++L+W+ G T D+I N+ RE+ + PIVEKMVE
Sbjct: 78 QHENRVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVE 123
>Glyma12g20980.1
Length = 933
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+ N+ RE+ + PIVEKMVE
Sbjct: 814 QHENKVGVAEMRMLRWMCGKTRQDKTRNEAIRERVGVAPIVEKMVE 859
>Glyma11g30070.1
Length = 365
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L W+ G T D+I N RE+ + PIVEKMVE
Sbjct: 288 QHETKVGVAEMRMLWWMCGKTRQDKIRNGDIRERVGVAPIVEKMVE 333
>Glyma08g22780.1
Length = 124
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ T D+I N+ RE+ + PIVEKMVE
Sbjct: 44 QHENKVGVAEMRMLRWMCSKTRQDKIRNEAIRERVGVAPIVEKMVE 89
>Glyma03g09160.1
Length = 942
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE-RVALDDLRKCVAK 61
+ E K+ V E+++L+W+ G T D+I N+ RE+ + PIVEKMVE R++ D ++
Sbjct: 832 KHENKVGVAEIRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLSGRDAQQNEMI 891
Query: 62 VNHLVS 67
+ H +S
Sbjct: 892 MKHYMS 897
>Glyma07g33290.1
Length = 213
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 3 QQECKLTVVEMKVLQWLNGYTIHDRIMNDIFREKTRLTPIVEKMVE 48
Q E K+ V EM++L+W+ G T D+I N+ RE + PIVEKMV+
Sbjct: 94 QHENKVGVAEMRMLRWMCGKTRQDKIRNEAIREMVGVAPIVEKMVK 139