Miyakogusa Predicted Gene

Lj1g3v1464140.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1464140.1 Non Chatacterized Hit- tr|C5WSW0|C5WSW0_SORBI
Putative uncharacterized protein Sb01g001150
OS=Sorghu,78.57,1e-18,SAM_DOMAIN,Sterile alpha motif domain;
SAM_1,Sterile alpha motif, type 1; STERILE ALPHA MOTIF (SAM)
,NODE_46709_length_1424_cov_20.514748.path2.1
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g37670.1                                                       202   4e-52
Glyma06g17430.1                                                       198   4e-51
Glyma05g38440.1                                                       165   4e-41
Glyma08g01230.1                                                       134   9e-32
Glyma08g28950.1                                                       129   2e-30
Glyma18g51850.1                                                       122   4e-28
Glyma15g10850.1                                                        74   1e-13
Glyma06g06090.1                                                        56   5e-08
Glyma06g24180.1                                                        49   5e-06

>Glyma04g37670.1 
          Length = 254

 Score =  202 bits (513), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/287 (49%), Positives = 161/287 (56%), Gaps = 74/287 (25%)

Query: 1   MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIGDQPNDSHPLRRXXXXX 60
           M EVPAPEAQL GG        S+P   GSKR RRPSVRLG+IGDQP DSHP R      
Sbjct: 1   MAEVPAPEAQLNGGAPTTAANSSDPI--GSKRQRRPSVRLGDIGDQPYDSHPRR------ 52

Query: 61  XXKSSWRLPF----SNASGKHSKTRPLTNLTG----FGGTLEGDD--DDVV--RWKLKDX 108
               +WRL F    ++A+ K SKTRPLTNLT     FG TLE D   D VV   WK+KD 
Sbjct: 53  AAAKTWRLAFDHPRNSAAVKPSKTRPLTNLTPAAAEFGETLESDGNVDSVVIGSWKVKDS 112

Query: 109 XXXXXXXXXXXXXXXXNWVASSQIEG------------------EDFDAE---------- 140
                           NW+  S+I+G                   DF AE          
Sbjct: 113 KKRGGSKRIRS-----NWI--SRIDGGEEDDKDVDVGVVDGYHHRDFSAEHSQSPLREEQ 165

Query: 141 SPVLHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRIWLNGLGLG 200
           SP++   ENLG         R  L HYHE      +NGN G      D +R+WLNGLGLG
Sbjct: 166 SPIM---ENLGVDEE-----REVL-HYHE------RNGNSGR----GDGVRVWLNGLGLG 206

Query: 201 RYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGK 247
           RYAPVFEIHE+DDEVL LLTLEDLKDMGI+AVGSRRK++CAIQKLGK
Sbjct: 207 RYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGK 253


>Glyma06g17430.1 
          Length = 262

 Score =  198 bits (504), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/293 (46%), Positives = 157/293 (53%), Gaps = 74/293 (25%)

Query: 1   MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIGDQPNDSHPLRRXXXXX 60
           M E+PAPEAQL GG        SEP   GSKR RRPSVRLG+IGDQP DSHP R      
Sbjct: 1   MAELPAPEAQLNGGAPATTANSSEPI--GSKRQRRPSVRLGDIGDQPYDSHPRR------ 52

Query: 61  XXKSSWRLPFSN--------ASGKHSKTRPLTNLTG------FGGTLEGDD--DDVV--R 102
               +WRL F +        A+ + SK RPLTNLT        G TLE D   D V+   
Sbjct: 53  AAAKTWRLAFDHPRHSSSAAAAARPSKIRPLTNLTPAAAVAELGETLESDGNVDSVLIGS 112

Query: 103 WKLKDXXXXXXXXXXXXXXXXXNWVA---------------SSQIEGEDFDAE------- 140
           WK+KD                 NW++                      DF AE       
Sbjct: 113 WKVKDSKKRGGGAKRIRS----NWISRIDGGEDDDDDIIVDEDGYHHRDFSAEHSESPMR 168

Query: 141 ---SPVLHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRIWLNGL 197
              SP++   ENLG            +QHYHE      +NGN G      D +R+WLNGL
Sbjct: 169 EEHSPIM---ENLGVDEERE------VQHYHE------RNGNSGS----GDGVRVWLNGL 209

Query: 198 GLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS 250
           GLGRYAPVFEIHE+DDEVL LLTLEDLKDMGI+AVGSRRK++CAIQKLGKGFS
Sbjct: 210 GLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGKGFS 262


>Glyma05g38440.1 
          Length = 276

 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/287 (41%), Positives = 141/287 (49%), Gaps = 48/287 (16%)

Query: 1   MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIG-DQPNDSHPLRRXXXX 59
           M E+  PE Q+ G V       SEP+  GSKR RRPSVRLG+IG DQP D H  R     
Sbjct: 1   MAEIQPPEGQINGAVGTLILHSSEPS-IGSKRQRRPSVRLGDIGGDQPYDPHARR----- 54

Query: 60  XXXKSSWRLPFSNAS-------------GKHSKTRPLTNLTGFGGTLE-------GDDDD 99
                 W+L F +               GK SKTRPLTNL+ F  TLE       G+ D 
Sbjct: 55  --NPKPWKLAFDSHHHHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEPCNDREPGNIDT 112

Query: 100 VV--RWKLKDXXXXXXXXXXXXXXXXXNWVASSQIEGEDFDAESPVLHSAENLGXXXXXX 157
           V    WK+K+                 NWV      G D   +        N        
Sbjct: 113 VAIGSWKVKESKKRGSVATKRVRS---NWVLRIDDGGGDNGGDEGEGEKYNNGEEDGDDD 169

Query: 158 XXYRATLQHYHEENARDNK--NGNGGGVRHG------------EDWIRIWLNGLGLGRYA 203
             YR       E   ++    +  G  +  G            ED +R+WLNGLGLGRYA
Sbjct: 170 DGYREFEVENSESPLKEQSPIHRKGNSIMMGLSYLHRLILMGVEDGVRVWLNGLGLGRYA 229

Query: 204 PVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS 250
           PVFE+HE+DDEVL +LTLEDLKDMGI+AVGSRRK+Y AIQKLGKGFS
Sbjct: 230 PVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS 276


>Glyma08g01230.1 
          Length = 264

 Score =  134 bits (337), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 138/302 (45%), Gaps = 90/302 (29%)

Query: 1   MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIG-DQPNDSHPLRRXXXX 59
           M E+  PE Q+ GG        SEP+  GSKR RRPSVRLG+IG DQP DSH  R     
Sbjct: 1   MAEIQPPEGQINGGAGTLILHSSEPS-IGSKRQRRPSVRLGDIGGDQPYDSHARRNT--- 56

Query: 60  XXXKSSWRLPFSNA----------SGKHSKTRPLTNLTGFGGTLEGDDD------DVV-- 101
                 W+L F N            GK SKTRPLTNL+ F  TLE  +D      D V  
Sbjct: 57  ----KPWKLAFDNHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEPSNDREPGNIDTVAI 112

Query: 102 -RWKLKDXXXXXXXXXXXXXXXXXNWVASSQI-----------------------EGEDF 137
             WK+K+                 NWV+                           E E  
Sbjct: 113 GSWKVKESKKRGSVATKRVRS---NWVSRIDGGGEGEGEKYNNEDEDGDDDDGYREFEVE 169

Query: 138 DAESPV-----LHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRI 192
           ++ESP+     +HS ENLG                             G  R  +  +R+
Sbjct: 170 NSESPLKEQSPIHSMENLGVD---------------------------GHRRVFKGTMRM 202

Query: 193 WLNGLGLGRYAPVFE----IHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKG 248
            + GLG+ +    F     +HE+DDEVL LLTLEDLKDMGI+AVGSRRK+Y AIQKLGKG
Sbjct: 203 VVGGLGVVKMGLGFGLMDWVHEVDDEVLPLLTLEDLKDMGISAVGSRRKMYTAIQKLGKG 262

Query: 249 FS 250
           FS
Sbjct: 263 FS 264


>Glyma08g28950.1 
          Length = 263

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/261 (41%), Positives = 131/261 (50%), Gaps = 54/261 (20%)

Query: 15  VTVAPNKPSE----PTATGSKRHRRPSVRLGEIGDQPNDSH----PLRRXXXXXXXKSSW 66
           VT   ++PS     P A   KR RRPSVRLGEIGDQ   +H     +RR         SW
Sbjct: 30  VTATTSQPSAEIVVPLALAPKRQRRPSVRLGEIGDQRASAHGHELHMRRPSMPPW---SW 86

Query: 67  RLPFSNASGKHSKTRPLTNLTGFGGTLEGDDDDVVRWKLKDXXXXXXXXXXXXXXXXXNW 126
           R P    S + SK R +TNLT  G   E  + +  R K K                  NW
Sbjct: 87  RTP--KESSRTSKARSVTNLTNGGE--EFGNSNSRRGKAK--------RGPATKRLRTNW 134

Query: 127 VASSQI------EG-EDFDAE---SPVLHSAENLGXXXXXXXXYRATLQHYH---EENAR 173
             ++ I      EG  DF+ E   SPV HS E+ G            + ++H    E+ R
Sbjct: 135 APTATIDENGDEEGFRDFEHEHEQSPV-HSVEDNG------------VDYWHVDRNEDPR 181

Query: 174 DNKNGNGG-----GVRHGEDWIRIWLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMG 228
              + N G       R   D +R WL  LGL RYAP+FEIHE+DDE+L +LTLEDLKDMG
Sbjct: 182 VRVSENDGVESESRERRKSDGVRSWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMG 241

Query: 229 INAVGSRRKLYCAIQKLGKGF 249
           INAVGSRRK+Y AIQKL K  
Sbjct: 242 INAVGSRRKMYTAIQKLRKCL 262


>Glyma18g51850.1 
          Length = 246

 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 116/238 (48%), Gaps = 49/238 (20%)

Query: 25  PTATGSKRHRRPSVRLGEIGDQP------NDSHPLRRXXXXXXXKSSWRLPFSNASGKHS 78
           P A   KR RRPSVRLGEIGDQ       +DSH  R          SWR P    S + S
Sbjct: 44  PLALAPKRQRRPSVRLGEIGDQRASSAHGHDSHTRR----PSMPPWSWRTP--KESSRTS 97

Query: 79  KTRPLTNLTGFGGTLEGDDDDVVRWKLKDXXXXXXXXXXXXXXXXXNWVASSQIEGEDFD 138
           K R +TNL   G   E  + +  R K K                  NW   + I+ E+ D
Sbjct: 98  KARTVTNLANGGE--EFGNSNSRRGKAK--------RGPATKRLRTNWAPRATID-ENGD 146

Query: 139 AESPVLHSAENLGXXXXXXXXYRATLQHYHEE--NARDNKNGNGG-----GVRHGEDWIR 191
            E                   +R   +H HE+  + R   + N G       R   D +R
Sbjct: 147 EEG------------------FR-DFEHEHEQSPDPRVRVSENDGVESESQERRKSDGVR 187

Query: 192 IWLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGF 249
            WL  LGL RYAP+FEIHE+DDE+L +LTLEDLKDMGINAVGSRRK+Y AIQKL K  
Sbjct: 188 SWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTAIQKLRKCL 245


>Glyma15g10850.1 
          Length = 42

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/40 (82%), Positives = 38/40 (95%)

Query: 199 LGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKL 238
           LGRYAPVF+IH++DDEVL LL LEDLKD+GINAVGSRRK+
Sbjct: 1   LGRYAPVFKIHKVDDEVLPLLMLEDLKDVGINAVGSRRKI 40


>Glyma06g06090.1 
          Length = 641

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 193 WLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKG 248
           WL GLGL +Y  VF   E+D + L  LT EDL  MGI A+G RRK+  A+ +L KG
Sbjct: 157 WLRGLGLNKYEDVFVREEVDWDTLQWLTEEDLLSMGIAALGPRRKIVHALSELRKG 212


>Glyma06g24180.1 
          Length = 81

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 37/43 (86%)

Query: 199 LGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCA 241
           L RYAP+FEIHE+DDE+L +L LEDLKDMG+N  GSRRK+Y A
Sbjct: 37  LSRYAPMFEIHEVDDELLLMLNLEDLKDMGMNIFGSRRKMYTA 79