Miyakogusa Predicted Gene
- Lj1g3v1464140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1464140.1 Non Chatacterized Hit- tr|C5WSW0|C5WSW0_SORBI
Putative uncharacterized protein Sb01g001150
OS=Sorghu,78.57,1e-18,SAM_DOMAIN,Sterile alpha motif domain;
SAM_1,Sterile alpha motif, type 1; STERILE ALPHA MOTIF (SAM)
,NODE_46709_length_1424_cov_20.514748.path2.1
(250 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g37670.1 202 4e-52
Glyma06g17430.1 198 4e-51
Glyma05g38440.1 165 4e-41
Glyma08g01230.1 134 9e-32
Glyma08g28950.1 129 2e-30
Glyma18g51850.1 122 4e-28
Glyma15g10850.1 74 1e-13
Glyma06g06090.1 56 5e-08
Glyma06g24180.1 49 5e-06
>Glyma04g37670.1
Length = 254
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/287 (49%), Positives = 161/287 (56%), Gaps = 74/287 (25%)
Query: 1 MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIGDQPNDSHPLRRXXXXX 60
M EVPAPEAQL GG S+P GSKR RRPSVRLG+IGDQP DSHP R
Sbjct: 1 MAEVPAPEAQLNGGAPTTAANSSDPI--GSKRQRRPSVRLGDIGDQPYDSHPRR------ 52
Query: 61 XXKSSWRLPF----SNASGKHSKTRPLTNLTG----FGGTLEGDD--DDVV--RWKLKDX 108
+WRL F ++A+ K SKTRPLTNLT FG TLE D D VV WK+KD
Sbjct: 53 AAAKTWRLAFDHPRNSAAVKPSKTRPLTNLTPAAAEFGETLESDGNVDSVVIGSWKVKDS 112
Query: 109 XXXXXXXXXXXXXXXXNWVASSQIEG------------------EDFDAE---------- 140
NW+ S+I+G DF AE
Sbjct: 113 KKRGGSKRIRS-----NWI--SRIDGGEEDDKDVDVGVVDGYHHRDFSAEHSQSPLREEQ 165
Query: 141 SPVLHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRIWLNGLGLG 200
SP++ ENLG R L HYHE +NGN G D +R+WLNGLGLG
Sbjct: 166 SPIM---ENLGVDEE-----REVL-HYHE------RNGNSGR----GDGVRVWLNGLGLG 206
Query: 201 RYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGK 247
RYAPVFEIHE+DDEVL LLTLEDLKDMGI+AVGSRRK++CAIQKLGK
Sbjct: 207 RYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGK 253
>Glyma06g17430.1
Length = 262
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 157/293 (53%), Gaps = 74/293 (25%)
Query: 1 MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIGDQPNDSHPLRRXXXXX 60
M E+PAPEAQL GG SEP GSKR RRPSVRLG+IGDQP DSHP R
Sbjct: 1 MAELPAPEAQLNGGAPATTANSSEPI--GSKRQRRPSVRLGDIGDQPYDSHPRR------ 52
Query: 61 XXKSSWRLPFSN--------ASGKHSKTRPLTNLTG------FGGTLEGDD--DDVV--R 102
+WRL F + A+ + SK RPLTNLT G TLE D D V+
Sbjct: 53 AAAKTWRLAFDHPRHSSSAAAAARPSKIRPLTNLTPAAAVAELGETLESDGNVDSVLIGS 112
Query: 103 WKLKDXXXXXXXXXXXXXXXXXNWVA---------------SSQIEGEDFDAE------- 140
WK+KD NW++ DF AE
Sbjct: 113 WKVKDSKKRGGGAKRIRS----NWISRIDGGEDDDDDIIVDEDGYHHRDFSAEHSESPMR 168
Query: 141 ---SPVLHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRIWLNGL 197
SP++ ENLG +QHYHE +NGN G D +R+WLNGL
Sbjct: 169 EEHSPIM---ENLGVDEERE------VQHYHE------RNGNSGS----GDGVRVWLNGL 209
Query: 198 GLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS 250
GLGRYAPVFEIHE+DDEVL LLTLEDLKDMGI+AVGSRRK++CAIQKLGKGFS
Sbjct: 210 GLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGKGFS 262
>Glyma05g38440.1
Length = 276
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 141/287 (49%), Gaps = 48/287 (16%)
Query: 1 MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIG-DQPNDSHPLRRXXXX 59
M E+ PE Q+ G V SEP+ GSKR RRPSVRLG+IG DQP D H R
Sbjct: 1 MAEIQPPEGQINGAVGTLILHSSEPS-IGSKRQRRPSVRLGDIGGDQPYDPHARR----- 54
Query: 60 XXXKSSWRLPFSNAS-------------GKHSKTRPLTNLTGFGGTLE-------GDDDD 99
W+L F + GK SKTRPLTNL+ F TLE G+ D
Sbjct: 55 --NPKPWKLAFDSHHHHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEPCNDREPGNIDT 112
Query: 100 VV--RWKLKDXXXXXXXXXXXXXXXXXNWVASSQIEGEDFDAESPVLHSAENLGXXXXXX 157
V WK+K+ NWV G D + N
Sbjct: 113 VAIGSWKVKESKKRGSVATKRVRS---NWVLRIDDGGGDNGGDEGEGEKYNNGEEDGDDD 169
Query: 158 XXYRATLQHYHEENARDNK--NGNGGGVRHG------------EDWIRIWLNGLGLGRYA 203
YR E ++ + G + G ED +R+WLNGLGLGRYA
Sbjct: 170 DGYREFEVENSESPLKEQSPIHRKGNSIMMGLSYLHRLILMGVEDGVRVWLNGLGLGRYA 229
Query: 204 PVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS 250
PVFE+HE+DDEVL +LTLEDLKDMGI+AVGSRRK+Y AIQKLGKGFS
Sbjct: 230 PVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS 276
>Glyma08g01230.1
Length = 264
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 138/302 (45%), Gaps = 90/302 (29%)
Query: 1 MTEVPAPEAQLTGGVTVAPNKPSEPTATGSKRHRRPSVRLGEIG-DQPNDSHPLRRXXXX 59
M E+ PE Q+ GG SEP+ GSKR RRPSVRLG+IG DQP DSH R
Sbjct: 1 MAEIQPPEGQINGGAGTLILHSSEPS-IGSKRQRRPSVRLGDIGGDQPYDSHARRNT--- 56
Query: 60 XXXKSSWRLPFSNA----------SGKHSKTRPLTNLTGFGGTLEGDDD------DVV-- 101
W+L F N GK SKTRPLTNL+ F TLE +D D V
Sbjct: 57 ----KPWKLAFDNHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEPSNDREPGNIDTVAI 112
Query: 102 -RWKLKDXXXXXXXXXXXXXXXXXNWVASSQI-----------------------EGEDF 137
WK+K+ NWV+ E E
Sbjct: 113 GSWKVKESKKRGSVATKRVRS---NWVSRIDGGGEGEGEKYNNEDEDGDDDDGYREFEVE 169
Query: 138 DAESPV-----LHSAENLGXXXXXXXXYRATLQHYHEENARDNKNGNGGGVRHGEDWIRI 192
++ESP+ +HS ENLG G R + +R+
Sbjct: 170 NSESPLKEQSPIHSMENLGVD---------------------------GHRRVFKGTMRM 202
Query: 193 WLNGLGLGRYAPVFE----IHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKG 248
+ GLG+ + F +HE+DDEVL LLTLEDLKDMGI+AVGSRRK+Y AIQKLGKG
Sbjct: 203 VVGGLGVVKMGLGFGLMDWVHEVDDEVLPLLTLEDLKDMGISAVGSRRKMYTAIQKLGKG 262
Query: 249 FS 250
FS
Sbjct: 263 FS 264
>Glyma08g28950.1
Length = 263
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 131/261 (50%), Gaps = 54/261 (20%)
Query: 15 VTVAPNKPSE----PTATGSKRHRRPSVRLGEIGDQPNDSH----PLRRXXXXXXXKSSW 66
VT ++PS P A KR RRPSVRLGEIGDQ +H +RR SW
Sbjct: 30 VTATTSQPSAEIVVPLALAPKRQRRPSVRLGEIGDQRASAHGHELHMRRPSMPPW---SW 86
Query: 67 RLPFSNASGKHSKTRPLTNLTGFGGTLEGDDDDVVRWKLKDXXXXXXXXXXXXXXXXXNW 126
R P S + SK R +TNLT G E + + R K K NW
Sbjct: 87 RTP--KESSRTSKARSVTNLTNGGE--EFGNSNSRRGKAK--------RGPATKRLRTNW 134
Query: 127 VASSQI------EG-EDFDAE---SPVLHSAENLGXXXXXXXXYRATLQHYH---EENAR 173
++ I EG DF+ E SPV HS E+ G + ++H E+ R
Sbjct: 135 APTATIDENGDEEGFRDFEHEHEQSPV-HSVEDNG------------VDYWHVDRNEDPR 181
Query: 174 DNKNGNGG-----GVRHGEDWIRIWLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMG 228
+ N G R D +R WL LGL RYAP+FEIHE+DDE+L +LTLEDLKDMG
Sbjct: 182 VRVSENDGVESESRERRKSDGVRSWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMG 241
Query: 229 INAVGSRRKLYCAIQKLGKGF 249
INAVGSRRK+Y AIQKL K
Sbjct: 242 INAVGSRRKMYTAIQKLRKCL 262
>Glyma18g51850.1
Length = 246
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 116/238 (48%), Gaps = 49/238 (20%)
Query: 25 PTATGSKRHRRPSVRLGEIGDQP------NDSHPLRRXXXXXXXKSSWRLPFSNASGKHS 78
P A KR RRPSVRLGEIGDQ +DSH R SWR P S + S
Sbjct: 44 PLALAPKRQRRPSVRLGEIGDQRASSAHGHDSHTRR----PSMPPWSWRTP--KESSRTS 97
Query: 79 KTRPLTNLTGFGGTLEGDDDDVVRWKLKDXXXXXXXXXXXXXXXXXNWVASSQIEGEDFD 138
K R +TNL G E + + R K K NW + I+ E+ D
Sbjct: 98 KARTVTNLANGGE--EFGNSNSRRGKAK--------RGPATKRLRTNWAPRATID-ENGD 146
Query: 139 AESPVLHSAENLGXXXXXXXXYRATLQHYHEE--NARDNKNGNGG-----GVRHGEDWIR 191
E +R +H HE+ + R + N G R D +R
Sbjct: 147 EEG------------------FR-DFEHEHEQSPDPRVRVSENDGVESESQERRKSDGVR 187
Query: 192 IWLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGF 249
WL LGL RYAP+FEIHE+DDE+L +LTLEDLKDMGINAVGSRRK+Y AIQKL K
Sbjct: 188 SWLYELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTAIQKLRKCL 245
>Glyma15g10850.1
Length = 42
Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 199 LGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKL 238
LGRYAPVF+IH++DDEVL LL LEDLKD+GINAVGSRRK+
Sbjct: 1 LGRYAPVFKIHKVDDEVLPLLMLEDLKDVGINAVGSRRKI 40
>Glyma06g06090.1
Length = 641
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 193 WLNGLGLGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCAIQKLGKG 248
WL GLGL +Y VF E+D + L LT EDL MGI A+G RRK+ A+ +L KG
Sbjct: 157 WLRGLGLNKYEDVFVREEVDWDTLQWLTEEDLLSMGIAALGPRRKIVHALSELRKG 212
>Glyma06g24180.1
Length = 81
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 199 LGRYAPVFEIHEIDDEVLHLLTLEDLKDMGINAVGSRRKLYCA 241
L RYAP+FEIHE+DDE+L +L LEDLKDMG+N GSRRK+Y A
Sbjct: 37 LSRYAPMFEIHEVDDELLLMLNLEDLKDMGMNIFGSRRKMYTA 79