Miyakogusa Predicted Gene

Lj1g3v1388160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1388160.1 Non Chatacterized Hit- tr|E1ZML2|E1ZML2_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,42.2,1e-17,Sdh5,Protein of unknown function DUF339; PROTEIN
EMI5 HOMOLOG, MITOCHONDRIAL,NULL; YgfY-like,Protein,CUFF.27310.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g37970.1                                                       273   5e-74
Glyma04g37970.2                                                       235   2e-62
Glyma08g00980.1                                                       233   1e-61
Glyma04g37970.3                                                       190   8e-49
Glyma04g34650.1                                                       107   6e-24
Glyma04g33980.1                                                        99   2e-21
Glyma11g27170.1                                                        72   3e-13
Glyma03g26350.1                                                        72   4e-13
Glyma05g33370.1                                                        53   2e-07

>Glyma04g37970.1 
          Length = 177

 Score =  273 bits (699), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 133/181 (73%), Positives = 152/181 (83%), Gaps = 8/181 (4%)

Query: 1   MASLRRAAINIHRVINANKRNITASTTPLTSRPLYGYSKISPFTSYPQ--SYEIDLSTEE 58
           M S R AAIN+ RVIN+NK  I AST PL +       + +PF+S+ Q  + EIDLS EE
Sbjct: 3   MGSFRNAAINVVRVINSNKATIAASTNPLHTL------RFTPFSSHTQNQTLEIDLSNEE 56

Query: 59  SKRRSLNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDLENPDLWKWLS 118
           SKRR  N+LLYRSKQRGFLELDLVLGKWVEDNIHSLDE RIK+LIHVLDLENPDLWKW+S
Sbjct: 57  SKRRLFNQLLYRSKQRGFLELDLVLGKWVEDNIHSLDEIRIKALIHVLDLENPDLWKWIS 116

Query: 119 GQEQPPESISANPVFAAIKEKLMKNLDSHAAPEVRAMPGQPWVRGWDDIKKGPGGPVTGN 178
           GQEQPPES+S NPVFAA++E++MKNLD+H+APEVRA PGQPWVRGWDDIKKG  GPV+GN
Sbjct: 117 GQEQPPESVSTNPVFAAVRERVMKNLDNHSAPEVRATPGQPWVRGWDDIKKGQDGPVSGN 176

Query: 179 Q 179
           Q
Sbjct: 177 Q 177


>Glyma04g37970.2 
          Length = 148

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/179 (65%), Positives = 131/179 (73%), Gaps = 33/179 (18%)

Query: 1   MASLRRAAINIHRVINANKRNITASTTPLTSRPLYGYSKISPFTSYPQSYEIDLSTEESK 60
           M S R AAIN+ RVIN+NK  I AST PL +                             
Sbjct: 3   MGSFRNAAINVVRVINSNKATIAASTNPLHTL---------------------------- 34

Query: 61  RRSLNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDLENPDLWKWLSGQ 120
                RLLYRSKQRGFLELDLVLGKWVEDNIHSLDE RIK+LIHVLDLENPDLWKW+SGQ
Sbjct: 35  -----RLLYRSKQRGFLELDLVLGKWVEDNIHSLDEIRIKALIHVLDLENPDLWKWISGQ 89

Query: 121 EQPPESISANPVFAAIKEKLMKNLDSHAAPEVRAMPGQPWVRGWDDIKKGPGGPVTGNQ 179
           EQPPES+S NPVFAA++E++MKNLD+H+APEVRA PGQPWVRGWDDIKKG  GPV+GNQ
Sbjct: 90  EQPPESVSTNPVFAAVRERVMKNLDNHSAPEVRATPGQPWVRGWDDIKKGQDGPVSGNQ 148


>Glyma08g00980.1 
          Length = 175

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 140/176 (79%), Gaps = 5/176 (2%)

Query: 7   AAINIHRVINANKRNITASTTPLTSRPLYGYSKISPFTSYPQSYE---IDLSTEESKRRS 63
           A+ ++ R++++   N    T PL +   +    ++PFTS+  SY+   I LS +ESKRR 
Sbjct: 2   ASFHLRRLVSS-VLNSRVQTNPLLTFRCFCSPPVTPFTSH-ASYDPNSIHLSNQESKRRL 59

Query: 64  LNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDLENPDLWKWLSGQEQP 123
            NRLLYRSKQRGFLELDLVLGKWVEDNIHSLDE R+++LI +LDLENPDLWKW+SGQEQP
Sbjct: 60  FNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDEYRVRALILLLDLENPDLWKWISGQEQP 119

Query: 124 PESISANPVFAAIKEKLMKNLDSHAAPEVRAMPGQPWVRGWDDIKKGPGGPVTGNQ 179
           PESI  NPVFAA++E +MKNL+SH+APE RA PG+PWVRGWDDIKK PGG +TGNQ
Sbjct: 120 PESIHINPVFAAVREGVMKNLESHSAPETRATPGKPWVRGWDDIKKFPGGSITGNQ 175


>Glyma04g37970.3 
          Length = 139

 Score =  190 bits (482), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 96/134 (71%), Positives = 108/134 (80%), Gaps = 8/134 (5%)

Query: 1   MASLRRAAINIHRVINANKRNITASTTPLTSRPLYGYSKISPFTSYPQ--SYEIDLSTEE 58
           M S R AAIN+ RVIN+NK  I AST PL +       + +PF+S+ Q  + EIDLS EE
Sbjct: 3   MGSFRNAAINVVRVINSNKATIAASTNPLHTL------RFTPFSSHTQNQTLEIDLSNEE 56

Query: 59  SKRRSLNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDLENPDLWKWLS 118
           SKRR  N+LLYRSKQRGFLELDLVLGKWVEDNIHSLDE RIK+LIHVLDLENPDLWKW+S
Sbjct: 57  SKRRLFNQLLYRSKQRGFLELDLVLGKWVEDNIHSLDEIRIKALIHVLDLENPDLWKWIS 116

Query: 119 GQEQPPESISANPV 132
           GQEQPPES+S NPV
Sbjct: 117 GQEQPPESVSTNPV 130


>Glyma04g34650.1 
          Length = 133

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)

Query: 34  LYGYSKISPFTSYPQ--SYEIDLSTEESKRRSLNRLLYRSKQRGFLELDLVLGKWVEDNI 91
            + YS+ + F S+ Q  + EIDLS EESKRR  N+LLYRS QRGFLELDLVLGKWVED+I
Sbjct: 3   FFCYSRFTTFLSHTQNQTLEIDLSNEESKRRLFNQLLYRSNQRGFLELDLVLGKWVEDSI 62

Query: 92  HSLDENRIKSLIHVLDL 108
           HSLDE  IK+L+HVLD+
Sbjct: 63  HSLDEILIKALVHVLDM 79


>Glyma04g33980.1 
          Length = 96

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 2/72 (2%)

Query: 40  ISPFTSYPQSY--EIDLSTEESKRRSLNRLLYRSKQRGFLELDLVLGKWVEDNIHSLDEN 97
            +PF S+ Q+   EIDLS +ESKR   N+LLYRS Q+GFLEL+LVLGKWVEDNIHSLDE 
Sbjct: 1   FTPFLSHTQNQIPEIDLSNKESKRSLFNQLLYRSNQQGFLELNLVLGKWVEDNIHSLDEI 60

Query: 98  RIKSLIHVLDLE 109
            IK+L+HVLD+E
Sbjct: 61  LIKALVHVLDME 72


>Glyma11g27170.1 
          Length = 143

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%)

Query: 71  SKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDL 108
           SKQRGFLE+DLVL KW EDNIHSLDENRIK+ IHVLDL
Sbjct: 106 SKQRGFLEMDLVLRKWAEDNIHSLDENRIKAPIHVLDL 143


>Glyma03g26350.1 
          Length = 70

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 39/44 (88%)

Query: 65  NRLLYRSKQRGFLELDLVLGKWVEDNIHSLDENRIKSLIHVLDL 108
           +RLLYRS QRGFLELDLVL KWV+DNI SLDE  IK+L+HVLD+
Sbjct: 9   DRLLYRSNQRGFLELDLVLKKWVDDNILSLDEILIKALVHVLDM 52


>Glyma05g33370.1 
          Length = 27

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/27 (88%), Positives = 26/27 (96%)

Query: 72 KQRGFLELDLVLGKWVEDNIHSLDENR 98
          KQRGFLELDLVLGKWVEDNI+SLD+ R
Sbjct: 1  KQRGFLELDLVLGKWVEDNINSLDQYR 27