Miyakogusa Predicted Gene

Lj1g3v1384120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1384120.1 Non Chatacterized Hit- tr|K4B349|K4B349_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.01,1e-18,seg,NULL; coiled-coil,NULL,CUFF.27254.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g33190.1                                                       110   4e-25
Glyma02g15260.1                                                        99   8e-22
Glyma04g03890.1                                                        69   9e-13
Glyma06g03990.1                                                        66   7e-12
Glyma19g32230.1                                                        46   9e-06

>Glyma07g33190.1 
          Length = 133

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 65/87 (74%), Gaps = 6/87 (6%)

Query: 2   SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGGSYDIESWVETKCSSCVGGRIX--- 58
           SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGH G YD+E+WVETKCSSCV GRI    
Sbjct: 27  SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGH-GEYDVETWVETKCSSCVDGRIAPPT 85

Query: 59  --XXXXXXXDLNGGEDAPPVEIPQEMK 83
                    + N G D PP E PQE+K
Sbjct: 86  PRPRPPPPPEPNSGGDLPPEEPPQEIK 112


>Glyma02g15260.1 
          Length = 130

 Score = 99.4 bits (246), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 53/56 (94%), Gaps = 1/56 (1%)

Query: 2  SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGGSYDIESWVETKCSSCVGGRI 57
          SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGH G +D+E+WVETKCSSCV GRI
Sbjct: 27 SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGH-GEFDVETWVETKCSSCVDGRI 81


>Glyma04g03890.1 
          Length = 121

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 2   SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGGSYDIESWVETKCSSCVGGRIXXXX 61
           S+GP+I VL V+ VLGVIA MIGRLCSGRR+MGH G YD+ESW E KCSSC+ GRI    
Sbjct: 27  SIGPLIGVLVVVIVLGVIAVMIGRLCSGRRIMGH-GQYDVESWAERKCSSCIDGRINLSL 85

Query: 62  XXX-XDLNGGEDAPPVEIPQEMKEEEH 87
                + +    A P+   QE K  E 
Sbjct: 86  PTRVSESSNSVPATPIHACQETKRPEQ 112


>Glyma06g03990.1 
          Length = 121

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/56 (73%), Positives = 46/56 (82%), Gaps = 1/56 (1%)

Query: 2  SVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGGSYDIESWVETKCSSCVGGRI 57
          S+GPVI VL V+ VLGVIA MIGRLCSGRR+MGH G YD+E W E KCSSC+ GRI
Sbjct: 27 SIGPVIGVLVVVIVLGVIAVMIGRLCSGRRIMGH-GQYDVERWAERKCSSCIDGRI 81


>Glyma19g32230.1 
          Length = 153

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 20 AGMIGRLCSGRRVMGHGGSYDIESWVETKCSSCVGG 55
          AGMI RLC GR   G+G + DIE WVE KC SC+ G
Sbjct: 43 AGMIARLCGGRHFGGNGEN-DIEGWVEKKCRSCIDG 77