Miyakogusa Predicted Gene

Lj1g3v1382080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1382080.1 Non Chatacterized Hit- tr|B9RHN0|B9RHN0_RICCO
R2r3-myb transcription factor, putative OS=Ricinus
com,44.9,0.000000000003,seg,NULL,CUFF.27261.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16820.1                                                        94   7e-20
Glyma04g38240.1                                                        91   5e-19
Glyma08g00810.1                                                        50   1e-06

>Glyma06g16820.1 
          Length = 301

 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 21/144 (14%)

Query: 25  FQLV--------KIGNDTVH-EDSNSSSGVTIEEASPHHHQQLNLELSIGLPSHQYQNQL 75
           FQLV        KIG D +  EDSNSSSGVT EE+ PHH  QLNL+LSIGLPS   Q Q+
Sbjct: 164 FQLVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHH--QLNLDLSIGLPS---QPQV 218

Query: 76  ASS-SSVKLKHEQQE---EPPRINLYQQWCGNVS--QGACVCYGLGFQTNQXXXXXXXXX 129
           +SS +  KLK E QE   + P++ LYQ +  N++  QG C+CY LG Q+NQ         
Sbjct: 219 SSSLNPEKLKPEPQEHDDQKPQV-LYQLYGKNITGQQGVCLCYNLGLQSNQACYCKTMGT 277

Query: 130 XXXXXXXXXXNEDDIFRFYRPMNV 153
                      + +++RFYRPMN+
Sbjct: 278 STTTVTTTTATDRNLYRFYRPMNI 301


>Glyma04g38240.1 
          Length = 302

 Score = 90.5 bits (223), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 84/143 (58%), Gaps = 25/143 (17%)

Query: 25  FQLV--------KIGNDTVH-EDSNSSSGVTIEEASPHHHQQLNLELSIGLPSHQYQNQL 75
           FQLV        KIG + V  EDSNSSSGVT EE+ PHH  QLNL+LSIGLPS   Q Q 
Sbjct: 171 FQLVSNSAYANTKIGTNLVAAEDSNSSSGVTTEESVPHH--QLNLDLSIGLPS---QPQG 225

Query: 76  ASSSSVKLKHEQQE---EPPRINLYQQWCGNVS--QGACVCYGLGFQTNQXXXXXXXXXX 130
           +S +  KLK E QE   + P++ LY +W GN++  QG C+CY LG Q+NQ          
Sbjct: 226 SSLNPEKLKPEPQEHDDQKPQV-LY-KWYGNITSQQGVCLCYNLGLQSNQTCYCKTMGTA 283

Query: 131 XXXXXXXXXNEDDIFRFYRPMNV 153
                     + +++RFYRPMN+
Sbjct: 284 TTTTAT----DSNLYRFYRPMNI 302


>Glyma08g00810.1 
          Length = 289

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 11/86 (12%)

Query: 38  DSNSSSGVTIEEASPHHHQQLNLELSIGLPSHQYQNQLASSSSVKLKHEQQEEPPRIN-- 95
           DSNSSSGVTIEEASP    Q+NLELSI  PS  +++  A+SS+ K    QQ+    I+  
Sbjct: 181 DSNSSSGVTIEEASP----QVNLELSIAPPSQPHED--AASSNKKCMFCQQQMGMLISES 234

Query: 96  -LYQQWC--GNVSQGACVCYGLGFQT 118
                WC  G      C C   GF T
Sbjct: 235 MCVCLWCNVGMQINPTCCCKAKGFVT 260