Miyakogusa Predicted Gene

Lj1g3v1374530.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1374530.3 Non Chatacterized Hit- tr|C5X6K7|C5X6K7_SORBI
Putative uncharacterized protein Sb02g012440
OS=Sorghu,31.11,1e-18,ZINC FINGER, CCHC DOMAIN CONTAINING 11,NULL;
POLY(A) POLYMERASE CID (PAP)-RELATED,NULL; seg,NULL; no,CUFF.27270.3
         (355 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16630.3                                                       360   2e-99
Glyma06g16630.2                                                       359   2e-99
Glyma06g16630.1                                                       354   8e-98
Glyma11g34420.1                                                       117   2e-26
Glyma18g03900.1                                                       104   2e-22
Glyma07g09020.1                                                        78   1e-14
Glyma03g02290.1                                                        76   4e-14

>Glyma06g16630.3 
          Length = 324

 Score =  360 bits (923), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/300 (61%), Positives = 215/300 (71%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 23  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 82

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 83  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 142

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 143 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 202

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 203 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 262

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVTKFIST 340
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM V KFIST
Sbjct: 263 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVIKFIST 322


>Glyma06g16630.2 
          Length = 316

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/300 (61%), Positives = 215/300 (71%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 15  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 74

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 75  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 134

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 135 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 194

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 195 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 254

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVTKFIST 340
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM V KFIST
Sbjct: 255 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVIKFIST 314


>Glyma06g16630.1 
          Length = 334

 Score =  354 bits (909), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 180/302 (59%), Positives = 213/302 (70%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 15  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 74

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 75  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 134

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 135 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 194

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 195 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 254

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVTKFIST 340
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM V  FI  
Sbjct: 255 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVEDFIDR 314

Query: 341 AH 342
           + 
Sbjct: 315 SQ 316


>Glyma11g34420.1 
          Length = 455

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 134/285 (47%), Gaps = 31/285 (10%)

Query: 59  SELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNSHDIPVVEGHGSFVMDMFT 118
           S LD ++ D    + P + D   R  ++  F  + E +   S     VE +GSFV ++FT
Sbjct: 5   SMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESV--ESLRGATVEPYGSFVSNLFT 62

Query: 119 NVSDLDLSINFHAKRENSLH-----EKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPI 173
              DLD+SI       N LH     +K K  L   + L +L  +G  + +Q    A VPI
Sbjct: 63  RWGDLDISIEL----SNGLHISSAGKKQKQTL-LGEVLKALRMKGGGSNLQFISNARVPI 117

Query: 174 IKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDG 233
           +KF     G+ C++S+NN  G             D RFR +  L+K WAKAH I +SK G
Sbjct: 118 LKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAG 177

Query: 234 ILNFLSIILFVAFHLQTCNPPILPPFSILLK------------DGADVMSVTKIVETYR- 280
             N  S+ L V F+ QTC P I PP   +              D  ++++ T      R 
Sbjct: 178 TFNSYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRF 237

Query: 281 --NYGKQ-NKESLAKLFITLLVKLASVESLW-EQGICASVYEGSW 321
             N  +  N++S+A+LF+  + K A ++S+  E GIC   Y G W
Sbjct: 238 ISNRARSINRKSVAELFVDFVGKFAKMDSMAVEMGICP--YTGKW 280


>Glyma18g03900.1 
          Length = 260

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 94/204 (46%), Gaps = 8/204 (3%)

Query: 59  SELDGLLCDTYVRMCPKEID---SFNRITLLRIFNLVAEELYGNSHDIPVVEGHGSFVMD 115
           S LD ++ D    + P + D    F  I  LR      E L G       VE  GSFV +
Sbjct: 5   STLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRG-----ATVEPFGSFVSN 59

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
           +FT   DLD+SI        S   K +      D L +L  +G  + +Q    A VPI+K
Sbjct: 60  LFTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILK 119

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
           F     G+ C++S+NN  G             D RFR +  L+K WAKAH I +SK G  
Sbjct: 120 FKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTF 179

Query: 236 NFLSIILFVAFHLQTCNPPILPPF 259
           N  S+ L V F+ QTC P I PP 
Sbjct: 180 NSYSLSLLVIFYFQTCIPAIFPPL 203


>Glyma07g09020.1 
          Length = 460

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 38/247 (15%)

Query: 72  MCPKEIDSFNRITLLRIFN--------------LVA--EELYGNSHDIPVVEGHGSFVMD 115
           MC ++ID FN +  L I+               LVA  E+L         +  +GS    
Sbjct: 130 MCRRDIDVFN-VPFLAIYGSLIPPEEEKLKQKKLVALLEKLVSKEWPTAKLYLYGSCANS 188

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
              + SD+D+ +      E +  EK K +++  D L S     ++  VQ+   A VPI+K
Sbjct: 189 FGVSKSDIDVCLAI----EEADMEKSKIIMKLADILQS----DNLQNVQALTRARVPIVK 240

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
             + VTGI C++ +NN                D R R+L F++K WAK+  +  +  G L
Sbjct: 241 LMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTL 300

Query: 236 NFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVT---------KIVETYRNYGKQN 286
           +  + +L     LQ   P ILP     L++     SVT           VE   ++G+ N
Sbjct: 301 SSYAYVLMCIHFLQMRRPAILP----CLQEMETTYSVTVDDIHCAYFDQVEKLSDFGRHN 356

Query: 287 KESLAKL 293
           KES+A+L
Sbjct: 357 KESIAQL 363


>Glyma03g02290.1 
          Length = 731

 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 38/247 (15%)

Query: 72  MCPKEIDSFNRITLLRIFNLV---AEELYGNSHDIPVVEG-------------HGSFVMD 115
           MC ++ID FN +  L I+  +    EE       + ++E              +GS    
Sbjct: 401 MCRRDIDDFN-VPFLAIYGSLIPPEEEKLKQKQLVAILEKLVSKEWPTSNLYLYGSCANS 459

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
              + SD+D+ +      E +  EK K +++  D L S     ++  VQ+   A VPI+K
Sbjct: 460 FGVSKSDIDVCLAI----EEADMEKSKIIMKLADILQS----DNLQNVQALTRARVPIVK 511

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
             + VTGI C++ +NN                D R R+L F++K WAK+  +  +  G L
Sbjct: 512 LMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTL 571

Query: 236 NFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVT---------KIVETYRNYGKQN 286
           +  + +L     LQ   P ILP     L++     SVT           VE   ++G+ N
Sbjct: 572 SSYAYVLMCIHFLQMRRPAILP----CLQEMETTYSVTVDDVHCAYFDQVEKLCDFGRHN 627

Query: 287 KESLAKL 293
           KES+A+L
Sbjct: 628 KESIAQL 634