Miyakogusa Predicted Gene

Lj1g3v1374530.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1374530.2 Non Chatacterized Hit- tr|D8SJR3|D8SJR3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.44,4e-18,coiled-coil,NULL; ZINC FINGER, CCHC DOMAIN
CONTAINING 11,NULL; POLY(A) POLYMERASE CID (PAP)-RELATED,,CUFF.27270.2
         (573 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16630.1                                                       372   e-103
Glyma06g16630.2                                                       348   6e-96
Glyma06g16630.3                                                       348   7e-96
Glyma11g34420.1                                                       133   4e-31
Glyma18g03900.1                                                       101   2e-21
Glyma03g02290.1                                                        88   2e-17
Glyma07g09020.1                                                        85   2e-16

>Glyma06g16630.1 
          Length = 334

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/308 (61%), Positives = 224/308 (72%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 15  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 74

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 75  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 134

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 135 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 194

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 195 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 254

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVEDFMDR 340
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM VEDF+DR
Sbjct: 255 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVEDFIDR 314

Query: 341 SQNVSRAV 348
           SQNV+RAV
Sbjct: 315 SQNVARAV 322


>Glyma06g16630.2 
          Length = 316

 Score =  348 bits (894), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 179/298 (60%), Positives = 212/298 (71%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 15  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 74

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 75  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 134

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 135 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 194

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 195 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 254

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVEDFM 338
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM V  F+
Sbjct: 255 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVIKFI 312


>Glyma06g16630.3 
          Length = 324

 Score =  348 bits (894), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 179/298 (60%), Positives = 212/298 (71%)

Query: 41  EKLESEILRKIKFTQTCVSELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNS 100
           +KLES+IL KI F+   V +LD LLCDT++R CP  +D  NR  L+ IFN + +E+YGN 
Sbjct: 23  KKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIFNTMTKEIYGNG 82

Query: 101 HDIPVVEGHGSFVMDMFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSV 160
              PVVE +GSFVMDMF   SD+DLS+NF+   E S  +KI AL RF  KL S++ +G V
Sbjct: 83  DGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNKKLQSIQSKGHV 142

Query: 161 TCVQSTVVAEVPIIKFTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKS 220
           T +Q    A VPIIK T+  TGIEC+LSV+N DG             DERFRKLCFLMKS
Sbjct: 143 TGLQLIFSARVPIIKVTDSGTGIECDLSVDNRDGINKSHIIRAISDIDERFRKLCFLMKS 202

Query: 221 WAKAHYIYSSKDGILNFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVTKIVETYR 280
           WAK H I S KD  L+  SI+ FVAFHLQT NPPILPPFSILLK+G +   V K+VETY 
Sbjct: 203 WAKVHDINSPKDSTLSSFSIVSFVAFHLQTRNPPILPPFSILLKEGDNPAYVAKVVETYF 262

Query: 281 NYGKQNKESLAKLFITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVEDFM 338
           NYGKQNKESLA LFITLLVKLASVE+LW++G CAS+YEGSWILK W   YSM V  F+
Sbjct: 263 NYGKQNKESLAMLFITLLVKLASVENLWQKGFCASLYEGSWILKSWKCSYSMSVIKFI 320


>Glyma11g34420.1 
          Length = 455

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 156/339 (46%), Gaps = 26/339 (7%)

Query: 59  SELDGLLCDTYVRMCPKEIDSFNRITLLRIFNLVAEELYGNSHDIPVVEGHGSFVMDMFT 118
           S LD ++ D    + P + D   R  ++  F  + E +   S     VE +GSFV ++FT
Sbjct: 5   SMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESV--ESLRGATVEPYGSFVSNLFT 62

Query: 119 NVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIKFTE 178
              DLD+SI        S   K +      + L +L  +G  + +Q    A VPI+KF  
Sbjct: 63  RWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKFKS 122

Query: 179 RVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGILNFL 238
              G+ C++S+NN  G             D RFR +  L+K WAKAH I +SK G  N  
Sbjct: 123 YRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNSY 182

Query: 239 SIILFVAFHLQTCNPPILPPFSILL------------KDGADVMSVTKIVETYRNYGKQ- 285
           S+ L V F+ QTC P I PP   +              D  ++++ T      R    + 
Sbjct: 183 SLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISNRA 242

Query: 286 ---NKESLAKLFITLLVKLASVESLW-EQGICASVYEGSW-----ILKYWNHHYSMRVED 336
              N++S+A+LF+  + K A ++S+  E GIC   Y G W      + +    Y++ VED
Sbjct: 243 RSINRKSVAELFVDFVGKFAKMDSMAVEMGICP--YTGKWEQIEDNMIWLPKTYAIFVED 300

Query: 337 FMDRSQNVSRAVGTAKVETIYRCIHKSISYLSQFLNNQI 375
             ++ QN +R+V   +++ I     ++   L+    NQI
Sbjct: 301 PFEQPQNTARSVSAGQLKKITETFARTHDLLTSTNQNQI 339


>Glyma18g03900.1 
          Length = 260

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 94/204 (46%), Gaps = 8/204 (3%)

Query: 59  SELDGLLCDTYVRMCPKEID---SFNRITLLRIFNLVAEELYGNSHDIPVVEGHGSFVMD 115
           S LD ++ D    + P + D    F  I  LR      E L G       VE  GSFV +
Sbjct: 5   STLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRG-----ATVEPFGSFVSN 59

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
           +FT   DLD+SI        S   K +      D L +L  +G  + +Q    A VPI+K
Sbjct: 60  LFTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILK 119

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
           F     G+ C++S+NN  G             D RFR +  L+K WAKAH I +SK G  
Sbjct: 120 FKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTF 179

Query: 236 NFLSIILFVAFHLQTCNPPILPPF 259
           N  S+ L V F+ QTC P I PP 
Sbjct: 180 NSYSLSLLVIFYFQTCIPAIFPPL 203


>Glyma03g02290.1 
          Length = 731

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)

Query: 72  MCPKEIDSFNRITLLRIFNLV---AEELYGNSHDIPVVEG-------------HGSFVMD 115
           MC ++ID FN +  L I+  +    EE       + ++E              +GS    
Sbjct: 401 MCRRDIDDFN-VPFLAIYGSLIPPEEEKLKQKQLVAILEKLVSKEWPTSNLYLYGSCANS 459

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
              + SD+D+ +      E +  EK K +++  D L S     ++  VQ+   A VPI+K
Sbjct: 460 FGVSKSDIDVCLAI----EEADMEKSKIIMKLADILQS----DNLQNVQALTRARVPIVK 511

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
             + VTGI C++ +NN                D R R+L F++K WAK+  +  +  G L
Sbjct: 512 LMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTL 571

Query: 236 NFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVT---------KIVETYRNYGKQN 286
           +  + +L     LQ   P ILP     L++     SVT           VE   ++G+ N
Sbjct: 572 SSYAYVLMCIHFLQMRRPAILP----CLQEMETTYSVTVDDVHCAYFDQVEKLCDFGRHN 627

Query: 287 KESLAKL------FITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVEDFMDR 340
           KES+A+L      +       A+       G   S  E  W  +  N  + + +ED  + 
Sbjct: 628 KESIAQLVRGFFHYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEI 687

Query: 341 SQNVSRAVGTAKVETI 356
           S ++ R V    ++ +
Sbjct: 688 SHDLGRVVDKHSIKVL 703


>Glyma07g09020.1 
          Length = 460

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)

Query: 72  MCPKEIDSFNRITLLRIFN--------------LVA--EELYGNSHDIPVVEGHGSFVMD 115
           MC ++ID FN +  L I+               LVA  E+L         +  +GS    
Sbjct: 130 MCRRDIDVFN-VPFLAIYGSLIPPEEEKLKQKKLVALLEKLVSKEWPTAKLYLYGSCANS 188

Query: 116 MFTNVSDLDLSINFHAKRENSLHEKIKALLRFRDKLDSLEREGSVTCVQSTVVAEVPIIK 175
              + SD+D+ +      E +  EK K +++  D L S     ++  VQ+   A VPI+K
Sbjct: 189 FGVSKSDIDVCLAI----EEADMEKSKIIMKLADILQS----DNLQNVQALTRARVPIVK 240

Query: 176 FTERVTGIECNLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHYIYSSKDGIL 235
             + VTGI C++ +NN                D R R+L F++K WAK+  +  +  G L
Sbjct: 241 LMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTL 300

Query: 236 NFLSIILFVAFHLQTCNPPILPPFSILLKDGADVMSVT---------KIVETYRNYGKQN 286
           +  + +L     LQ   P ILP     L++     SVT           VE   ++G+ N
Sbjct: 301 SSYAYVLMCIHFLQMRRPAILP----CLQEMETTYSVTVDDIHCAYFDQVEKLSDFGRHN 356

Query: 287 KESLAKL------FITLLVKLASVESLWEQGICASVYEGSWILKYWNHHYSMRVEDFMDR 340
           KES+A+L      +       A+       G   S  E  W  +  N  + + +ED  + 
Sbjct: 357 KESIAQLVRGFFHYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEI 416

Query: 341 SQNVSRAVGTAKVETI 356
           S ++ R V    ++ +
Sbjct: 417 SHDLGRVVDKHSIKVL 432