Miyakogusa Predicted Gene

Lj1g3v1355780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355780.1 Non Chatacterized Hit- tr|I3T4G7|I3T4G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.14,0,seg,NULL;
coiled-coil,NULL; SNF7 - RELATED,NULL; Snf7,Snf7,CUFF.27149.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16240.1                                                       335   2e-92
Glyma04g38750.1                                                       334   5e-92

>Glyma06g16240.1 
          Length = 215

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 174/215 (80%), Positives = 185/215 (86%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPKVTDVD+AILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKVTDVDKAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVDAWL+NVEQQLADIELASKQKAVF+SLKAGNDAMKAIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDAWLINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIED 120

Query: 121 VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEE 180
           VQKLMDDT EAKAYQDEI+ I+GEKLSAEDEEEILAEF++LE QLTV+DLPEVP S +EE
Sbjct: 121 VQKLMDDTAEAKAYQDEINEIMGEKLSAEDEEEILAEFEDLEIQLTVQDLPEVPPSANEE 180

Query: 181 TDEKLDLPDVPTKAPATSSAEVSTKRKVMEEPLAA 215
            +EKLDLPDVPTKAP TS AEVSTKRKVMEEPLAA
Sbjct: 181 IEEKLDLPDVPTKAPVTSDAEVSTKRKVMEEPLAA 215


>Glyma04g38750.1 
          Length = 215

 Score =  334 bits (856), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 174/215 (80%), Positives = 184/215 (85%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPKVTDVD+AILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKVTDVDKAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVDAWL+NVEQQLADIELASKQKAVF+SLKAGNDAMKAIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDAWLINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIED 120

Query: 121 VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEE 180
           VQKLMDDT EAKAYQDEI+ I+GEKLSAEDEEEILAEF++LE QLTV+DLPEVP SV EE
Sbjct: 121 VQKLMDDTAEAKAYQDEINEIMGEKLSAEDEEEILAEFEDLEIQLTVQDLPEVPPSVHEE 180

Query: 181 TDEKLDLPDVPTKAPATSSAEVSTKRKVMEEPLAA 215
            +EKLDLPDVPTKAP TS AEVSTK KVMEEPLAA
Sbjct: 181 IEEKLDLPDVPTKAPVTSDAEVSTKGKVMEEPLAA 215