Miyakogusa Predicted Gene

Lj1g3v1355770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1355770.1 Non Chatacterized Hit- tr|I1KBM2|I1KBM2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4668
PE=,82.02,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
FAD/NAD(P)-binding domain,NULL; Prenylcys,CUFF.27162.1
         (536 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16230.1                                                       772   0.0  
Glyma04g38760.1                                                        96   1e-19

>Glyma06g16230.1 
          Length = 515

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/506 (78%), Positives = 427/506 (84%), Gaps = 8/506 (1%)

Query: 39  LRMILPILLT-FLSLSQAQPHSDAPPP----TVCIVGAGIAGSSVAHFLRKYSPEPTPTT 93
           + + LP LLT FL+LSQAQPHSD PPP     VC++GAGI GSSVAHFLRKYSP  TP+T
Sbjct: 10  MSLKLPFLLTLFLALSQAQPHSDDPPPPPSSNVCVIGAGIGGSSVAHFLRKYSPSSTPST 69

Query: 94  KILVFERNAIVGGRIATVTIAGETFEAGASILHPKNLHAVDYTKLLKLKVKPPGS--DSL 151
           KI VFERN  VGGRIATVT+AGETFEAGASILHPKNLH VDY K+LKLKVK P +  DSL
Sbjct: 70  KIRVFERNGRVGGRIATVTVAGETFEAGASILHPKNLHTVDYVKILKLKVKEPTASEDSL 129

Query: 152 SLGIWDGNKFVFKTVE-ISSDLPLIDELLKLPFIDTLVSLFNSARMFLRYGFSLLKMQNF 210
           SLGIWDGNKFVFKTV  +SS +PLID+LLKLPF++TLVS  NSA MF+RYGFSL KMQNF
Sbjct: 130 SLGIWDGNKFVFKTVSPLSSTVPLIDKLLKLPFVNTLVSFVNSALMFVRYGFSLFKMQNF 189

Query: 211 VESTVGRFLKYYEEPGSRPVFETVDEMLKWAGLYNLTTRTLEDELVDAGLSPLLINELVT 270
           VE  V +F+KYYE+PGSRP+FETVDEML+WAGLYNLTTRTL DELVDAGLS  LINELVT
Sbjct: 190 VEIAVDKFVKYYEDPGSRPIFETVDEMLQWAGLYNLTTRTLRDELVDAGLSTSLINELVT 249

Query: 271 VITRINYGQSVYMXXXXXXXXXXXXXXXXXXXXXXNWQMAAGLINRSDVALHLNEEIKSV 330
           VITRINYGQSV M                      NWQMAAGLIN+SDVALHL+EEIKSV
Sbjct: 250 VITRINYGQSVSMSGLGGVVSLAGSGGGLWSIEGGNWQMAAGLINQSDVALHLHEEIKSV 309

Query: 331 AYHGDYYELNSTTGKSYNCEVAVIATPLDELNINFDPQIPIPERKLQHTYTTFVRGLLNP 390
           A  GDYYELNST G SY CEVAV+ATPLDEL+I F P I IPERKLQHT+TTFVRGLLNP
Sbjct: 310 ADLGDYYELNSTKGNSYRCEVAVVATPLDELDIQFIPPISIPERKLQHTFTTFVRGLLNP 369

Query: 391 VYFGFKAASKIPDLVGTIEDPKLPFSSISVLKKHSEKESTYKIFSRQPMADTLLDSIFSV 450
            YFG KA +KIPDLVGTIEDP+LPFS I+VLKKH+EKESTYK+FSRQPMADTLLDSIFSV
Sbjct: 370 AYFGLKAVTKIPDLVGTIEDPELPFSCIAVLKKHNEKESTYKLFSRQPMADTLLDSIFSV 429

Query: 451 RTETIRINWGAYPHYHAPEKFAPFILDGRHLYYVNAFENAASTMETSAVAAENIARLILS 510
           R ETIRINW AYPHYHAPE FAPFILDGRHLYYVNAFENAASTMETSAVAAENIARLILS
Sbjct: 430 RKETIRINWAAYPHYHAPEVFAPFILDGRHLYYVNAFENAASTMETSAVAAENIARLILS 489

Query: 511 RYFSKVNVHPSILSASSQGEDTHLDL 536
           RYF +V VH S LSASSQGE THLDL
Sbjct: 490 RYFGQVIVHSSNLSASSQGEGTHLDL 515


>Glyma04g38760.1 
          Length = 49

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 44/48 (91%)

Query: 449 SVRTETIRINWGAYPHYHAPEKFAPFILDGRHLYYVNAFENAASTMET 496
           SVR ETIRINW AYP YHAPE FAPFILDGRHLYYVNAFENAASTMET
Sbjct: 1   SVRKETIRINWAAYPLYHAPEVFAPFILDGRHLYYVNAFENAASTMET 48