Miyakogusa Predicted Gene
- Lj1g3v1318060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1318060.1 Non Chatacterized Hit- tr|J3LLE2|J3LLE2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,35.46,4e-18,seg,NULL; zinc finger,Zinc finger, CCCH-type; no
description,NULL; CCCH zinc finger,NULL; ZF_C3H1,Zi,CUFF.27195.1
(802 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g15720.1 768 0.0
Glyma04g39220.1 378 e-104
Glyma04g39220.2 263 6e-70
Glyma05g32400.1 94 6e-19
Glyma06g22290.1 77 6e-14
Glyma04g32250.1 77 8e-14
Glyma13g31050.2 57 9e-08
Glyma13g31050.1 57 9e-08
Glyma15g08320.1 57 9e-08
>Glyma06g15720.1
Length = 828
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/850 (53%), Positives = 548/850 (64%), Gaps = 70/850 (8%)
Query: 1 MNKSGRKLSSKWDLIDERESEFAPDGVANSNSTSSRWSYKERNDRLNPRMEFLSKEPLSG 60
M+ SG+K SSKWDL D +F+PD + S WS D+L + SG
Sbjct: 1 MSGSGKKRSSKWDLRDN--PDFSPD---DGKQLRSGWS--SAGDKL---------KHFSG 44
Query: 61 GTHSNKYDGTNNEEYRVLDATIARDTDGSYGMEMSPGFEDWKNK--HSQSPKN--XXXXX 116
G SNK D N++YRVLD+T+ D D SY +MSPG + WK+K +SQSPKN
Sbjct: 45 GRGSNK-DNIMNKDYRVLDSTMEWDEDESYDHKMSPGLDAWKHKRHNSQSPKNGWSRSVS 103
Query: 117 XXXXXXXPPHGFKLDSGVNGRNRMRPEGLAQPCRDFAAGKCIRGSQCHFLHHDNQNYENG 176
PPHGF+ DSGVN R+RMR G QPCRDFAAGKC RGS CHFLH DNQN+E+G
Sbjct: 104 RSSRSRSPPHGFRWDSGVNDRSRMRAGGSTQPCRDFAAGKCRRGSHCHFLH-DNQNHEDG 162
Query: 177 RESRQRQDRAPGYSAPHESGDISLTSGRSDEACINFAKGRCRFGASCRHVHHGNSDEFGK 236
E + R+D AP YSAP E D SL SGRSDEACINF KGRCR GASC+ VHH NSD K
Sbjct: 163 WEDKYREDGAPRYSAPREGRDYSLKSGRSDEACINFPKGRCRMGASCKFVHHNNSDGHSK 222
Query: 237 VSVGESSRENDIDNRRLENSFKQGGRHDLNRSADTPCRFFAFGNCRNGNHCRFSHDRQXX 296
VSV +RE +ID R ++SF+QG H NR DT C+FFA +CRNG +CRFSHDRQ
Sbjct: 223 VSVDGLTREREIDRRHRDSSFEQGSGHGPNR-GDTLCKFFANESCRNGKYCRFSHDRQAC 281
Query: 297 XXXXXXXXXXXXXXNQGGD-QVSNRPKLSDSASSNGRLRDDRWRSDGSIADVSKVWDGPK 355
N GGD + +RPKLSDS S N R R DRW SDG+ AD KVWD P+
Sbjct: 282 RSHNRRLRDDRWASNPGGDYHMLDRPKLSDSVSPNRRPRGDRWGSDGNKADADKVWDSPE 341
Query: 356 SNDLSAVSNSRKLVEDNQDGIMGAPGHGFSAWPMSDGWDHSLDKNMVHDKTSFSSDKKEP 415
ND AVS++ KLVED + ++ A GF+ M DGW HSLDK+ VH K FSSDKKE
Sbjct: 342 RNDTVAVSDTAKLVEDKSENVVAAE-QGFTPLAMRDGWGHSLDKSRVHSKQPFSSDKKEA 400
Query: 416 NLWAAGNATANIHTSQPVGTGIWPGDE-QMSPDWN--VGTSSHFKKNHEQNN-------- 464
+ W AGNA AN+H SQ VGT IW GD+ +MSPDW+ V +SS ++ HEQN
Sbjct: 401 DSWIAGNA-ANMHGSQSVGTDIWLGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFM 459
Query: 465 ---------LQVAPGHGYNQNAQNVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQE 515
+Q+APG +NQNA++ N LHSSS VGQ+Q ++P + IV+GM QE
Sbjct: 460 YLATSEHDRIQIAPGQDFNQNAESFNPLHSSSCQVVGQTQVAAPILPSQGGIVDGMLKQE 519
Query: 516 LFTEKKYIGEPNIMDASLLQVGSRNPS-TQNMVSKEQLVQLTCLTASLAQILGTGSQLPQ 574
+ TEKKY EPNIMDA LLQV SR+P T+N+V KEQL QLT L+ASLA ILGTG QLPQ
Sbjct: 520 VSTEKKYTTEPNIMDAGLLQVSSRDPPPTENVVGKEQLAQLTNLSASLAHILGTGQQLPQ 579
Query: 575 LCSNLNSHDAKDTPS-------GKPVSIAFSKPDPSIGFQKHNNP-------------SG 614
L + LNSHDAK T S P+S +PDP++G K +P SG
Sbjct: 580 LYAALNSHDAKGTSSLAKAEVLAMPLSNTLIRPDPAVGLLKQYDPMCDSVEPKSAVASSG 639
Query: 615 FSPMISPSKIIPKESVEMPSLLSNSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDN 673
+P I P K + ++ VE+ S + + Q +S K+A SEE LVKS LI LQ +NIG N
Sbjct: 640 VTPAIPPCKKVAEDVVEISSQSNTARQNCGNSSKSAGSEE-LVKSDPLILLQPGQNIGVN 698
Query: 674 KESN-EMVAEEKRSSRGENKITKESGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFI 732
K+ N E++ EE++ S+ + K TKESGPLE+M+Q+ GPDE KKTK +KG RAFK +LVEF+
Sbjct: 699 KDDNKEVLPEERQKSKDDPKNTKESGPLENMEQTDGPDEAKKTKGMKGSRAFKFALVEFV 758
Query: 733 KELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLI 792
KELLKPTWK+GQITKDDYK I Q A++PQTQEKID YLS SKPKLNKL+
Sbjct: 759 KELLKPTWKDGQITKDDYKTIVKKVVDKVTGSMQGANIPQTQEKIDHYLSFSKPKLNKLV 818
Query: 793 QAYVEKVQKA 802
QAYVEKVQKA
Sbjct: 819 QAYVEKVQKA 828
>Glyma04g39220.1
Length = 416
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/418 (53%), Positives = 271/418 (64%), Gaps = 44/418 (10%)
Query: 427 IHTSQPVGTGIWPGDE-QMSPDWN--VGTSSHFKKNHEQNN-----------------LQ 466
+H SQ +GT IW GD+ +MSPDW+ V +SS ++ HEQN +Q
Sbjct: 1 MHGSQSIGTDIWLGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFMYLDTSEHDRIQ 60
Query: 467 VAPGHGYNQNAQNVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQELFTEKKYIGEP 526
+APG G+NQNA + N+LHSSS AVGQSQ ++P + IV+GM QE+ TEKKY EP
Sbjct: 61 IAPGQGFNQNAVSFNSLHSSSCQAVGQSQVAVPILPSKGGIVDGMLKQEVSTEKKYTAEP 120
Query: 527 NIMDASLLQVGSRNPS-TQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSNLNSHDAK 585
NIMDA L QV SRNP T N+V KEQL QLT L+ASLA ILGTG QLPQL + LNSHDAK
Sbjct: 121 NIMDAGLSQVSSRNPPPTANVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAK 180
Query: 586 DTPS-------GKPVSIAFSKPDPSIGFQKHNNP------------SGFSPMISPSKIIP 626
D S PVS F +PDP++G K +P SG P I PS+ +
Sbjct: 181 DISSLAKTEVPAMPVSNTFIRPDPTVGLLKQYDPMCDSVEPKGAVASGVPPAIPPSQKV- 239
Query: 627 KESVEMPSLLSNSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDNKESN-EMVAEEK 684
+ VE+PS + Q DS K A SEE LVKS LIQLQ +N G NK++N EM+ EE
Sbjct: 240 ADVVEIPSQSNTGRQNCGDSSKAAGSEE-LVKSDPLIQLQPGQNTGVNKDNNKEMLPEET 298
Query: 685 RSSRGENKITKESGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQ 744
S+ + K TKESGP E+M+Q+ GPDE KK K +KG RAFK +LVEF+KELLKPTWK+GQ
Sbjct: 299 LKSKDDPKSTKESGPFENMEQTDGPDEAKKIKGMKGNRAFKFALVEFVKELLKPTWKDGQ 358
Query: 745 ITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 802
ITK+DYK I Q ++PQTQEKID YLS SKPKLNKL+QAYVEKVQKA
Sbjct: 359 ITKEDYKTIVKKVVDKVTGSMQGVNIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 416
>Glyma04g39220.2
Length = 341
Score = 263 bits (672), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/332 (50%), Positives = 205/332 (61%), Gaps = 44/332 (13%)
Query: 427 IHTSQPVGTGIWPGDE-QMSPDWN--VGTSSHFKKNHEQNN-----------------LQ 466
+H SQ +GT IW GD+ +MSPDW+ V +SS ++ HEQN +Q
Sbjct: 1 MHGSQSIGTDIWLGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFMYLDTSEHDRIQ 60
Query: 467 VAPGHGYNQNAQNVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQELFTEKKYIGEP 526
+APG G+NQNA + N+LHSSS AVGQSQ ++P + IV+GM QE+ TEKKY EP
Sbjct: 61 IAPGQGFNQNAVSFNSLHSSSCQAVGQSQVAVPILPSKGGIVDGMLKQEVSTEKKYTAEP 120
Query: 527 NIMDASLLQVGSRN-PSTQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSNLNSHDAK 585
NIMDA L QV SRN P T N+V KEQL QLT L+ASLA ILGTG QLPQL + LNSHDAK
Sbjct: 121 NIMDAGLSQVSSRNPPPTANVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAK 180
Query: 586 DTPS-------GKPVSIAFSKPDPSIGFQKHNNP------------SGFSPMISPSKIIP 626
D S PVS F +PDP++G K +P SG P I PS+ +
Sbjct: 181 DISSLAKTEVPAMPVSNTFIRPDPTVGLLKQYDPMCDSVEPKGAVASGVPPAIPPSQKV- 239
Query: 627 KESVEMPSLLSNSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDNKESN-EMVAEEK 684
+ VE+PS + Q DS K A SEE LVKS LIQLQ +N G NK++N EM+ EE
Sbjct: 240 ADVVEIPSQSNTGRQNCGDSSKAAGSEE-LVKSDPLIQLQPGQNTGVNKDNNKEMLPEET 298
Query: 685 RSSRGENKITKESGPLESMDQSGGPDEIKKTK 716
S+ + K TKESGP E+M+Q+ GPDE KK K
Sbjct: 299 LKSKDDPKSTKESGPFENMEQTDGPDEAKKIK 330
>Glyma05g32400.1
Length = 74
Score = 94.0 bits (232), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 53/74 (71%)
Query: 720 GMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDR 779
G+ FK SLVEF+KELL PTWK+G+ITK+DYK I Q AH+PQTQEKID
Sbjct: 1 GIHTFKFSLVEFVKELLNPTWKDGKITKEDYKAIVKKVTDKVIDTVQGAHIPQTQEKIDC 60
Query: 780 YLSVSKPKLNKLIQ 793
YLS SK KLNKL+Q
Sbjct: 61 YLSSSKSKLNKLVQ 74
>Glyma06g22290.1
Length = 512
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 665 QKDENIGDNKESNEMVAEEKRSSRGENKITKESGPLESMDQSGGPDEIKKTKDVKGMRAF 724
Q ++ G+ ++ E+ A E S + + K + ++Q P + KK+KD + M+ F
Sbjct: 376 QNNDEYGETADA-EVGAVENESLSDDVDVAKMTSGEVEINQVKSPGKRKKSKDSRSMKLF 434
Query: 725 KGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDRYLSVS 784
K S+ F+KE+LKP+W++G ++K +K I + VP++Q KI +Y+ S
Sbjct: 435 KVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQVKISQYIDSS 494
Query: 785 KPKLNKLIQAYVEKVQKA 802
+ KL KL+ YV+K K
Sbjct: 495 QRKLTKLVMGYVDKYVKV 512
>Glyma04g32250.1
Length = 744
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 697 SGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXX 756
SG +E ++Q P + KK+KD + M+ FK S+ F+KE+LKP+W++G ++K +K I
Sbjct: 640 SGEVE-INQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKK 698
Query: 757 XXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 802
+ VP++Q KI +Y+ S+ KL KL+ YV+K K
Sbjct: 699 TVDKVSGAMKGHRVPKSQTKISQYIDSSQRKLTKLVMGYVDKYVKV 744
>Glyma13g31050.2
Length = 431
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 716 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 775
K+ K ++ F+ L++ +KELLKP W EG+++KD + I + +P T +
Sbjct: 346 KESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP-TID 404
Query: 776 KIDRYLSVSKPKLNKLIQAYVEKVQKA 802
+Y+S S+ K+ KL+ YV K K+
Sbjct: 405 TAKQYVSSSQVKIAKLVNGYVNKYGKS 431
>Glyma13g31050.1
Length = 431
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 716 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 775
K+ K ++ F+ L++ +KELLKP W EG+++KD + I + +P T +
Sbjct: 346 KESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP-TID 404
Query: 776 KIDRYLSVSKPKLNKLIQAYVEKVQKA 802
+Y+S S+ K+ KL+ YV K K+
Sbjct: 405 TAKQYVSSSQVKIAKLVNGYVNKYGKS 431
>Glyma15g08320.1
Length = 464
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 716 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 775
K+ K ++ F+ +LV+ +KELLKP W EG ++KD + I + +P +
Sbjct: 379 KESKALKFFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKKSVDKVVSTLEPHQIP-IMD 437
Query: 776 KIDRYLSVSKPKLNKLIQAYVEKVQK 801
+Y+S S+ K+ KL+ YV K K
Sbjct: 438 TAKQYVSSSQVKIAKLVNGYVNKYGK 463