Miyakogusa Predicted Gene

Lj1g3v1316960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1316960.1 Non Chatacterized Hit- tr|K4C4A3|K4C4A3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,56.41,7e-16,PEN-2,Gamma-secretase aspartyl protease complex,
presenilin enhancer-2 subunit; GAMMA-SECRETASE SUBU,CUFF.27111.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39050.2                                                       188   1e-48
Glyma04g39050.1                                                       188   1e-48
Glyma06g15920.1                                                       188   1e-48

>Glyma04g39050.2 
          Length = 149

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 98/118 (83%)

Query: 19  NPFASSLPLWPTIDGQLGLSEEESEKHARRFYNFGFXXXXXXXXXNCFYFWPVLRHAHSF 78
           N  ASS+PLWPTIDG LGLSEEES  +ARRFY FGF         NCFYFWPVLRH+HSF
Sbjct: 32  NSVASSMPLWPTIDGPLGLSEEESVGYARRFYTFGFALLPLLWAVNCFYFWPVLRHSHSF 91

Query: 79  PRIRPYIVGSAVGFAVFTALLCSWALTFSIGGERLFGPVWDQLVMYNLADRLGLTSWN 136
           PRIRPY+VGSA+GFAV   LL SW+LTF+IGGERLFGPVWDQLVMYNLADRLGLT W+
Sbjct: 92  PRIRPYVVGSAIGFAVCATLLSSWSLTFAIGGERLFGPVWDQLVMYNLADRLGLTGWS 149


>Glyma04g39050.1 
          Length = 149

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 98/118 (83%)

Query: 19  NPFASSLPLWPTIDGQLGLSEEESEKHARRFYNFGFXXXXXXXXXNCFYFWPVLRHAHSF 78
           N  ASS+PLWPTIDG LGLSEEES  +ARRFY FGF         NCFYFWPVLRH+HSF
Sbjct: 32  NSVASSMPLWPTIDGPLGLSEEESVGYARRFYTFGFALLPLLWAVNCFYFWPVLRHSHSF 91

Query: 79  PRIRPYIVGSAVGFAVFTALLCSWALTFSIGGERLFGPVWDQLVMYNLADRLGLTSWN 136
           PRIRPY+VGSA+GFAV   LL SW+LTF+IGGERLFGPVWDQLVMYNLADRLGLT W+
Sbjct: 92  PRIRPYVVGSAIGFAVCATLLSSWSLTFAIGGERLFGPVWDQLVMYNLADRLGLTGWS 149


>Glyma06g15920.1 
          Length = 136

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 97/115 (84%)

Query: 22  ASSLPLWPTIDGQLGLSEEESEKHARRFYNFGFXXXXXXXXXNCFYFWPVLRHAHSFPRI 81
           ASS+P+WPTIDG LGLSEEES  +ARRFY FGF         NCFYFWP LRH+HSFPRI
Sbjct: 22  ASSVPVWPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFYFWPALRHSHSFPRI 81

Query: 82  RPYIVGSAVGFAVFTALLCSWALTFSIGGERLFGPVWDQLVMYNLADRLGLTSWN 136
           RPY+VGSA+GFAVF  LL SWALTF+IGGERLFGPVWDQLVMYNLADRLGLT W+
Sbjct: 82  RPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLADRLGLTGWS 136