Miyakogusa Predicted Gene

Lj1g3v1300590.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1300590.3 Non Chatacterized Hit- tr|F6H4A0|F6H4A0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.25,0.000000000000005,seg,NULL,CUFF.27087.3
         (171 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g15070.2                                                        97   6e-21
Glyma06g15070.1                                                        97   6e-21
Glyma05g31670.1                                                        94   8e-20
Glyma08g14920.1                                                        92   2e-19

>Glyma06g15070.2 
          Length = 752

 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 84/160 (52%), Gaps = 20/160 (12%)

Query: 1   MASSSLLLRPELKFLPPQITPKRRC-FSLSGFCLCSVSRH---NVSLRM-RIRPVKEEGA 55
           MA+SS L  PEL FL PQ TPKRR  FS       SVSRH   NVSLR  RIR  +EE A
Sbjct: 1   MATSSPLPLPELHFLSPQTTPKRRISFSKLPSSPYSVSRHVTSNVSLRTSRIRATREESA 60

Query: 56  AVVDLAERASDVKWXXXXXXXXXXXXXXXXXFVRGY---DLNGSLVKYXXXXXXXXXXXX 112
               LAER +DV+W                  V GY     NGSLVKY            
Sbjct: 61  ----LAERLNDVEWTGNGAAAAAADGNGAS--VGGYVNGATNGSLVKYGYENGNGVSAEV 114

Query: 113 XXXXEASSK-----RKRRLEEIGKEDAWFKQRGEPQVEVA 147
               EAS+K     RK+RLEEIGKEDAWFKQ G  QVEVA
Sbjct: 115 LEV-EASNKLSEDGRKKRLEEIGKEDAWFKQSGNEQVEVA 153


>Glyma06g15070.1 
          Length = 752

 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 84/160 (52%), Gaps = 20/160 (12%)

Query: 1   MASSSLLLRPELKFLPPQITPKRRC-FSLSGFCLCSVSRH---NVSLRM-RIRPVKEEGA 55
           MA+SS L  PEL FL PQ TPKRR  FS       SVSRH   NVSLR  RIR  +EE A
Sbjct: 1   MATSSPLPLPELHFLSPQTTPKRRISFSKLPSSPYSVSRHVTSNVSLRTSRIRATREESA 60

Query: 56  AVVDLAERASDVKWXXXXXXXXXXXXXXXXXFVRGY---DLNGSLVKYXXXXXXXXXXXX 112
               LAER +DV+W                  V GY     NGSLVKY            
Sbjct: 61  ----LAERLNDVEWTGNGAAAAAADGNGAS--VGGYVNGATNGSLVKYGYENGNGVSAEV 114

Query: 113 XXXXEASSK-----RKRRLEEIGKEDAWFKQRGEPQVEVA 147
               EAS+K     RK+RLEEIGKEDAWFKQ G  QVEVA
Sbjct: 115 LEV-EASNKLSEDGRKKRLEEIGKEDAWFKQSGNEQVEVA 153


>Glyma05g31670.1 
          Length = 756

 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 87/166 (52%), Gaps = 28/166 (16%)

Query: 1   MASSSLLLRPELKFLPPQITPKRRCFSLSGFCLCSVSRHNVSLRMRIRPVKEEGAAVVDL 60
           MASSS LL  ELKFL PQITPKRR  SLS FC    SR+NV+LR RIR  KEEGA +   
Sbjct: 1   MASSSSLLLLELKFLAPQITPKRRR-SLSRFC-SQNSRYNVALRTRIRAFKEEGAVI--- 55

Query: 61  AERASDVKWXXXXXXXXXXXXXXXXXFVRGY-----------DLNGSLVKYXXXX---XX 106
            +R +DVKW                  V GY           + NGSLVKY         
Sbjct: 56  -DRVNDVKWSGNGVAASEYGANGS---VNGYANGVSGVRESENANGSLVKYVNDNGNGNG 111

Query: 107 XXXXXXXXXXEASSK----RKRRLEEIGKEDAWF-KQRGEPQVEVA 147
                     EAS +    RK+RLEEIGKE+AWF KQ GE  +EVA
Sbjct: 112 VAAEVVEDSAEASKRMEDGRKKRLEEIGKEEAWFKKQTGEAPIEVA 157


>Glyma08g14920.1 
          Length = 757

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 83/166 (50%), Gaps = 27/166 (16%)

Query: 1   MASSSLLLRPELKFLPPQITPKRRCFSLSGFC----LCSVSRHNVSLRMRIRPVKEEGAA 56
           MASSS LL  E KFL PQITPKRR  SLS FC    +   SR+NV+LR RIR V EEGA 
Sbjct: 1   MASSSSLLLLEFKFLAPQITPKRRR-SLSSFCSRHSVSLNSRYNVALRTRIRAVMEEGAV 59

Query: 57  VVDLAERASDVKWXXXXXXXXXXXXXXXXXFVRGY-----------DLNGSLVKYXXXXX 105
           +    +R +DVKW                  V GY           D NG LVKY     
Sbjct: 60  I----DRVNDVKWSGNGVAASEYGGNGS---VNGYVNGVSGVMESEDANGRLVKYVNGNG 112

Query: 106 XXXXXXXXXXXEASSK---RKRRLEEIGKEDAWF-KQRGEPQVEVA 147
                          K   RK+RLEEIGKEDAWF KQ GE  +EVA
Sbjct: 113 VAAEVVEDFAESLKRKEDGRKKRLEEIGKEDAWFKKQTGEAPIEVA 158