Miyakogusa Predicted Gene

Lj1g3v1290380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1290380.1 tr|G7LD35|G7LD35_MEDTR Protein IDA-like protein
OS=Medicago truncatula GN=MTR_8g092860 PE=4
SV=1,80,1e-16,seg,NULL,NODE_65681_length_804_cov_27.624378.path1.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g15570.1                                                        91   3e-19
Glyma04g39310.1                                                        86   1e-17
Glyma05g32300.1                                                        85   2e-17
Glyma06g15620.1                                                        82   1e-16

>Glyma08g15570.1 
          Length = 77

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 49/56 (87%), Gaps = 2/56 (3%)

Query: 22 GHCHGSR-NSNVFKLKHKSQHHGHFFGFLPKRMPIPYSTPSRKHNDIGLKSTWRSP 76
          GHCHGSR  + VFK K KSQHHGHF GFLPKRMPIPYSTPSRKHNDIGL+S WRSP
Sbjct: 23 GHCHGSRATTTVFKFKPKSQHHGHFSGFLPKRMPIPYSTPSRKHNDIGLRS-WRSP 77


>Glyma04g39310.1 
          Length = 65

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 1/55 (1%)

Query: 22 GHCHGSRNSNVFKLKHKSQHHGHFFGFLPKRMPIPYSTPSRKHNDIGLKSTWRSP 76
          GH HGSR +NVFKLK KSQH GHFFGFLPKR+ IP+S+PS+KHNDIGL+S WRSP
Sbjct: 12 GHGHGSRTTNVFKLKPKSQHTGHFFGFLPKRIHIPFSSPSKKHNDIGLQS-WRSP 65


>Glyma05g32300.1 
          Length = 99

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 44/52 (84%), Gaps = 1/52 (1%)

Query: 20 IFGHCHGSR-NSNVFKLKHKSQHHGHFFGFLPKRMPIPYSTPSRKHNDIGLK 70
          I GHCHGSR  + VFK K KS HHGHF GFLPKRMPIPYSTPSRKHNDIGL+
Sbjct: 23 ILGHCHGSRATTTVFKFKPKSPHHGHFSGFLPKRMPIPYSTPSRKHNDIGLR 74


>Glyma06g15620.1 
          Length = 77

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 48/55 (87%), Gaps = 1/55 (1%)

Query: 22 GHCHGSRNSNVFKLKHKSQHHGHFFGFLPKRMPIPYSTPSRKHNDIGLKSTWRSP 76
          GH HGSR +NVFKLK KSQH GHFFGFLPKR+ IP+S+PS+KHNDIGL+S  RSP
Sbjct: 24 GHGHGSRTTNVFKLKPKSQHTGHFFGFLPKRIHIPFSSPSKKHNDIGLQS-LRSP 77