Miyakogusa Predicted Gene
- Lj1g3v1276990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1276990.1 tr|A4RYB0|A4RYB0_OSTLU PsaN, PSI-N, photosystem I
polypeptide OS=Ostreococcus lucimarinus (strain
CC,43.48,3e-17,PsaN,Photosystem I PsaN, reaction centre subunit N;
seg,NULL,CUFF.27078.1
(167 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g15540.1 242 1e-64
Glyma04g39370.5 241 2e-64
Glyma06g15540.2 181 4e-46
Glyma04g39370.4 181 4e-46
Glyma04g39370.1 180 7e-46
Glyma04g39370.3 96 2e-20
Glyma04g39370.2 96 2e-20
>Glyma06g15540.1
Length = 166
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/167 (74%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACDGRR 60
MA MNSSVLAC YAISGA CSELN K+TS+ S+ SG KLP+IK +ARVP+ K +GRR
Sbjct: 1 MAGMNSSVLACSYAISGAACSELNGKVTSVASVASSGYKLPLIKC-EARVPKAKESEGRR 59
Query: 61 XXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFG 120
F +A SNSSANAG+I++YLE+SKANKELNDKKRLAT+GANFARAYTV+FG
Sbjct: 60 GALVLLAATLFISAASNSSANAGIIDDYLERSKANKELNDKKRLATTGANFARAYTVEFG 119
Query: 121 TCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKYKCGSNVFWKW 167
+CKFPENFTGCQDLAKQKKVPF+S+DLELECEGKDKYKCGSNVFWKW
Sbjct: 120 SCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 166
>Glyma04g39370.5
Length = 167
Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 144/168 (85%), Gaps = 2/168 (1%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACDG-R 59
MAAMNSSVLAC YAISGA CSELN K+TS+ + SG KLP+IKA +ARVP+ K +G R
Sbjct: 1 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKA-EARVPKAKESEGGR 59
Query: 60 RXXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQF 119
R F++A SNSSANAG+IE+YLE+SKANKELNDKKRLAT+GANFARAYTV+F
Sbjct: 60 RGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYTVEF 119
Query: 120 GTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKYKCGSNVFWKW 167
G+CKFPENFTGCQDLAKQKKVPF+S+DLELECEGKDKYKCGSNVFWKW
Sbjct: 120 GSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 167
>Glyma06g15540.2
Length = 138
Score = 181 bits (459), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACDGRR 60
MA MNSSVLAC YAISGA CSELN K+TS+ S+ SG KLP+IK +ARVP+ K +GRR
Sbjct: 1 MAGMNSSVLACSYAISGAACSELNGKVTSVASVASSGYKLPLIKC-EARVPKAKESEGRR 59
Query: 61 XXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFG 120
F +A SNSSANAG+I++YLE+SKANKELNDKKRLAT+GANFARAYTV+FG
Sbjct: 60 GALVLLAATLFISAASNSSANAGIIDDYLERSKANKELNDKKRLATTGANFARAYTVEFG 119
Query: 121 TCKFPENFTGCQDLAKQK 138
+CKFPENFTGCQDLAKQK
Sbjct: 120 SCKFPENFTGCQDLAKQK 137
>Glyma04g39370.4
Length = 139
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 115/139 (82%), Gaps = 2/139 (1%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACDG-R 59
MAAMNSSVLAC YAISGA CSELN K+TS+ + SG KLP+IKA +ARVP+ K +G R
Sbjct: 1 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKA-EARVPKAKESEGGR 59
Query: 60 RXXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQF 119
R F++A SNSSANAG+IE+YLE+SKANKELNDKKRLAT+GANFARAYTV+F
Sbjct: 60 RGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYTVEF 119
Query: 120 GTCKFPENFTGCQDLAKQK 138
G+CKFPENFTGCQDLAKQK
Sbjct: 120 GSCKFPENFTGCQDLAKQK 138
>Glyma04g39370.1
Length = 184
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 115/139 (82%), Gaps = 2/139 (1%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACDG-R 59
MAAMNSSVLAC YAISGA CSELN K+TS+ + SG KLP+IKA +ARVP+ K +G R
Sbjct: 1 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKA-EARVPKAKESEGGR 59
Query: 60 RXXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQF 119
R F++A SNSSANAG+IE+YLE+SKANKELNDKKRLAT+GANFARAYTV+F
Sbjct: 60 RGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYTVEF 119
Query: 120 GTCKFPENFTGCQDLAKQK 138
G+CKFPENFTGCQDLAKQK
Sbjct: 120 GSCKFPENFTGCQDLAKQK 138
>Glyma04g39370.3
Length = 105
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACD-GR 59
MAAMNSSVLAC YAISGA CSELN K+TS+ + SG KLP+IKA +ARVP+ K + GR
Sbjct: 1 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKA-EARVPKAKESEGGR 59
Query: 60 RXXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANK 96
R F++A SNSSANAG+IE+YLE+SKANK
Sbjct: 60 RGALVLLAATLFTSAASNSSANAGIIEDYLERSKANK 96
>Glyma04g39370.2
Length = 105
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 1 MAAMNSSVLACGYAISGAGCSELNSKLTSMPSLTVSGSKLPVIKARQARVPEPKACD-GR 59
MAAMNSSVLAC YAISGA CSELN K+TS+ + SG KLP+IKA +ARVP+ K + GR
Sbjct: 1 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKA-EARVPKAKESEGGR 59
Query: 60 RXXXXXXXXXXFSTAVSNSSANAGVIEEYLEKSKANK 96
R F++A SNSSANAG+IE+YLE+SKANK
Sbjct: 60 RGALVLLAATLFTSAASNSSANAGIIEDYLERSKANK 96